CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33277	Canola	nucleus	96.34	95.8
Bra038901.1-P	Field mustard	nucleus	95.49	94.96
CDX78007	Canola	nucleus	90.99	89.47
CDX73719	Canola	nucleus	90.42	88.92
AT3G51470.1	Thale cress	nucleus	90.14	88.64
VIT_07s0031g02160.t01	Wine grape	cytosol	71.83	70.64
PGSC0003DMT400059610	Potato	cytosol	70.42	67.39
KRH76528	Soybean	cytosol	70.14	66.58
KRH28935	Soybean	nucleus	70.14	66.58
Solyc02g082490.2.1	Tomato	cytosol	68.73	63.54
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	68.73	63.54
GSMUA_Achr11P...	Banana	plastid	65.35	62.37
GSMUA_Achr4P25900_001	Banana	cytosol	65.07	60.47
TraesCS1A01G202300.1	Wheat	plastid	62.82	60.27
GSMUA_Achr9P23890_001	Banana	plastid	63.66	60.27
TraesCS1B01G216500.1	Wheat	plastid	62.54	60.0
KXG39006	Sorghum	plastid	62.82	59.95
CDY37699	Canola	cytosol	65.07	59.84
TraesCS1D01G205700.1	Wheat	plastid	62.25	59.73
Zm00001d000391_P002	Maize	plastid	62.54	59.68
CDY17190	Canola	cytosol	62.82	59.47
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	63.94	59.27
CDY53789	Canola	cytosol	64.23	59.22
Zm00001d029772_P001	Maize	plastid	62.25	58.93
CDY27953	Canola	cytosol	62.82	58.38
HORVU1Hr1G052160.1	Barley	plastid	62.25	55.39
GSMUA_AchrUn_...	Banana	cytosol	65.63	51.89
CDY11515	Canola	mitochondrion	47.32	44.21
CDX76745	Canola	nucleus	48.45	43.88
CDX93981	Canola	cytosol	46.2	43.62
CDY11411	Canola	cytosol	45.92	43.58
CDX76624	Canola	cytosol	45.92	43.47
CDY37787	Canola	cytosol	43.94	42.51
CDY20937	Canola	cytosol	41.41	39.41
CDX93640	Canola	cytosol	40.56	38.4
CDX95863	Canola	golgi, mitochondrion	37.46	31.74
CDX76775	Canola	nucleus	27.32	27.17
CDX92122	Canola	mitochondrion	25.35	26.63
CDY64720	Canola	nucleus	27.04	26.3
CDY64719	Canola	nucleus	27.04	26.3
CDY26191	Canola	cytosol	26.76	26.17
CDY13457	Canola	cytosol	25.92	26.14
CDY53471	Canola	nucleus	26.76	26.1
CDX72331	Canola	cytosol	25.63	25.85
CDY34740	Canola	nucleus	27.61	24.75
CDY66303	Canola	plastid	43.94	24.72
CDY19191	Canola	cytosol, nucleus, peroxisome	27.04	24.43
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.08	22.62
CDY22485	Canola	cytosol	28.45	15.37
CDY35434	Canola	cytosol, plastid	27.61	14.92

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:A0A078FTP7
UniProt:A0A078FTP7	EnsemblPlants:CDY16304	ProteinID:CDY16304	ProteinID:CDY16304.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00090807001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF304
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EF2F88	SEG:seg	:

Description

BnaC01g23390DBnaC01g23390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTP7]

Coordinates

chrLK032062:+:545106..546325

Molecular Weight (calculated)

38625.8 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.364

Length

355 amino acids

Sequence
(BLAST)

001: MASLTEVSPM IGDDKAAHLS SSGKPPRDLS VMRHCNSTAW LIDSEGDERC GPEGDNTTFQ PVFRSGSWSD KGPKRSMEDE FICVDDLTDH IGSSSSTGAF
101: YGVFDGHGGI DAASFTKTNI LKLVTQDKHF PSNTKKATRS AFVKTDHALA DAPSLDKSSG TTALTALILD KTMLIANAGD SRAVLGKRGR AIELSKDHKP
201: NCTSEKLRIE KLGGVIYDGY LNGQLSVARA LGDWHIKGTK GSLCPLSCEP ELEEIVLTEE DEFLIMGCDG LWDVMNSQCA VTMVRRELMQ HNDPERCSQA
301: LVKEALQRNS CDNLTVVVVC FSKDPPPRIE IPKSHKRRSI SAEGLDLLKG VLNDL

Best Arabidopsis Sequence Match ( AT3G51470.1 )
(BLAST)

001: MAPVTEVSPM INTLEVADDK MTNLSSSGKP PRNISAMRHC NSTAWLTDYE GDERFGAKSP EGVNSTFQPV FRSGSWSDKG PKQSMEDEFI CVDDLTEYIG
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L

Arabidopsis Description

Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.