CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76528	Soybean	cytosol	95.19	95.19
Bra036796.1-P	Field mustard	nucleus	62.83	74.6
VIT_07s0031g02160.t01	Wine grape	cytosol	71.39	73.96
KRH62979	Soybean	cytosol	31.55	73.29
CDY16304	Canola	nucleus	66.58	70.14
AT3G51470.1	Thale cress	nucleus	67.65	70.08
CDX73719	Canola	nucleus	67.38	69.81
CDY33277	Canola	nucleus	66.58	69.75
CDX78007	Canola	nucleus	66.84	69.25
Bra038901.1-P	Field mustard	nucleus	66.04	69.19
PGSC0003DMT400059610	Potato	cytosol	66.04	66.58
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	65.51	63.8
Solyc02g082490.2.1	Tomato	cytosol	65.51	63.8
GSMUA_Achr11P...	Banana	plastid	60.96	61.29
TraesCS1A01G202300.1	Wheat	plastid	59.36	60.0
TraesCS1B01G216500.1	Wheat	plastid	59.09	59.73
KRH51582	Soybean	cytosol	61.23	59.48
TraesCS1D01G205700.1	Wheat	plastid	58.82	59.46
KXG39006	Sorghum	plastid	59.09	59.41
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	60.7	59.27
GSMUA_Achr4P25900_001	Banana	cytosol	60.43	59.16
Zm00001d000391_P002	Maize	plastid	58.56	58.87
Zm00001d029772_P001	Maize	plastid	58.29	58.13
GSMUA_Achr9P23890_001	Banana	plastid	58.02	57.87
HORVU1Hr1G052160.1	Barley	plastid	59.36	55.64
KRH60899	Soybean	cytosol	48.4	54.85
GSMUA_AchrUn_...	Banana	cytosol	62.03	51.67
KRH52505	Soybean	cytosol	45.19	45.68
KRH61828	Soybean	cytosol	44.92	45.41
KRH12874	Soybean	cytosol	44.65	44.06
KRH03568	Soybean	cytosol	44.12	43.08
KRH20243	Soybean	cytosol	44.12	43.08
KRH37886	Soybean	cytosol	43.05	42.26
KRH02420	Soybean	cytosol	42.51	41.84
KRH31749	Soybean	cytosol	43.58	41.16
KRH69165	Soybean	cytosol	43.05	40.66
KRH50630	Soybean	cytosol	41.71	40.41
KRH36917	Soybean	cytosol	42.51	39.26
KRH39122	Soybean	cytosol	24.6	28.31
KRH15637	Soybean	cytosol	24.6	27.14
KRH52312	Soybean	cytosol	24.87	26.96
KRH48594	Soybean	cytosol, peroxisome, plastid	17.38	26.75
KRH05380	Soybean	golgi	24.87	26.12
KRH44580	Soybean	endoplasmic reticulum	24.33	24.73
KRH47317	Soybean	cytosol	24.33	24.73
KRH61653	Soybean	cytosol	8.29	22.79
KRH61652	Soybean	cytosol	11.5	22.28
KRH71677	Soybean	cytosol	26.74	15.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100781874	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10
EMBL:ACUP02006773	EnsemblPlantsGene:GLYMA_11G087000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1LIC2	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH28935	ProteinID:KRH28935	ProteinID:KRH28935.1	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF304	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00023CBD4C	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:6526033..6529595

Molecular Weight (calculated)

40316.1 Da

IEP (calculated)

5.486

GRAVY (calculated)

-0.199

Length

374 amino acids

Sequence
(BLAST)

001: MSGVGGGCPC PRGNSECSIE DLNGDTVGNL NQNAAKPPRD HSVMRHCISS SWSAETESNM NIVGLKSSTE EKSNFSLVMR SGSCSDKGPK QYMEDEFICA
101: DILSECVDLG EDLPSPAAFY GVFDGHGGVD AASFARKNIL KFIVEDAHFP CGIKKAVKCA FVKADLAFRD ASALDSSSGT TALIALMLGS SMLIANAGDS
201: RAVLGKRGRA IELSKDHKPN CTSERLRIEK LGGVIYDGYL YGQLSVARAL GDWHIKGSKG SKSPLSSEPE LEEIVLTEED EFLIMGCDGL WDVMSSQCAV
301: TMVRRELMQH NDPTTCAKVL VAEALQRNTC DNLTVVVVCF SKDPPSKIEI PRSYRRRSIS AEGLDLLKGV LNGR

Best Arabidopsis Sequence Match ( AT3G51470.1 )
(BLAST)

001: MAPVTEVSPM INTLEVADDK MTNLSSSGKP PRNISAMRHC NSTAWLTDYE GDERFGAKSP EGVNSTFQPV FRSGSWSDKG PKQSMEDEFI CVDDLTEYIG
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L

Arabidopsis Description

Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.