CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12874	Soybean	cytosol	91.6	92.08
KRH20243	Soybean	cytosol	75.59	75.2
KRH03568	Soybean	cytosol	73.75	73.37
VIT_11s0118g00700.t01	Wine grape	cytosol	66.93	71.63
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	56.69	68.35
GSMUA_Achr3P13350_001	Banana	cytosol	52.49	68.03
EES05962	Sorghum	cytosol	61.15	65.63
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	58.53	65.59
PGSC0003DMT400020228	Potato	cytosol	65.88	65.54
Zm00001d052018_P001	Maize	cytosol	46.72	65.44
TraesCS6A01G363900.1	Wheat	cytosol	60.1	65.06
TraesCS6B01G398500.1	Wheat	cytosol	59.84	64.77
EER89322	Sorghum	cytosol	60.1	64.69
GSMUA_Achr7P20900_001	Banana	nucleus	60.63	64.53
PGSC0003DMT400078867	Potato	nucleus	64.83	64.49
TraesCS7A01G143200.2	Wheat	cytosol	59.58	64.31
Os06t0179700-01	Rice	cytosol, plastid	60.63	64.17
Os02t0799000-01	Rice	cytosol, plastid	59.32	63.84
TraesCS7D01G144400.3	Wheat	cytosol	59.06	63.74
Solyc07g007220.2.1	Tomato	nucleus	64.04	63.71
TraesCS7B01G045100.1	Wheat	cytosol	58.53	63.17
Zm00001d045128_P001	Maize	cytosol	58.53	62.99
HORVU7Hr1G029330.7	Barley	plastid	58.01	62.43
HORVU6Hr1G086560.2	Barley	mitochondrion	59.84	58.61
KRH62979	Soybean	cytosol	23.36	55.28
KRH61828	Soybean	cytosol	46.19	47.57
KRH52505	Soybean	cytosol	45.93	47.3
KRH51582	Soybean	cytosol	44.36	43.9
KRH76528	Soybean	cytosol	42.52	43.32
KRH28935	Soybean	nucleus	42.26	43.05
KRH02420	Soybean	cytosol	40.68	40.79
KRH69165	Soybean	cytosol	42.26	40.66
KRH31749	Soybean	cytosol	42.26	40.66
KRH50630	Soybean	cytosol	40.16	39.64
KRH36917	Soybean	cytosol	41.99	39.51
KRH60899	Soybean	cytosol	34.12	39.39
KRH15637	Soybean	cytosol	24.41	27.43
KRH52312	Soybean	cytosol	24.67	27.25
KRH05380	Soybean	golgi	24.67	26.4
KRH47317	Soybean	cytosol	25.46	26.36
KRH44580	Soybean	endoplasmic reticulum	25.2	26.09
KRH61652	Soybean	cytosol	12.86	25.39
KRH39122	Soybean	cytosol	20.47	24.0
KRH61653	Soybean	cytosol	8.4	23.53
KRH48594	Soybean	cytosol, peroxisome, plastid	13.39	20.99
KRH71677	Soybean	cytosol	27.3	15.78

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	EMBL:ACUP02005544	ncoils:Coil
EnsemblPlantsGene:GLYMA_09G096600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1L2B9	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH37886	ProteinID:KRH37886	ProteinID:KRH37886.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF521
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00023C9F10	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:15045967..15049883

Molecular Weight (calculated)

42732.5 Da

IEP (calculated)

4.819

GRAVY (calculated)

-0.384

Length

381 amino acids

Sequence
(BLAST)

001: MCVKDQEKDM IDNTTTSSWP LQHCHLLLKT HMDKEGSSLR TSCDDDTTNN ISVQNSFPLE SICEDAVVAD KKQNLMNFVL ALRSGEWSDI GERPYMEDTH
101: ICIGDLAKKF NYDVPFEEAV SFYGVFDGHG GKSAAQFVRD NLPRVIVEDV NFPLDLEKVV KRSFLETDAA FLKTYSHEPS VSSGTTAITA IIFGRSLLVA
201: NAGDCRAVLS RHGRAIEMSK DHRPSCINER TRVESLGGFV DDGYLNGQLG VTRALGDWHL EGMKEMSDRE GPLSAEPELK LMTLTKEDEF LIIASDGIWD
301: VFSSQNAVDF ARRKLQEHND EKQCCKEIVQ EATKRGSTDN LTVVMVCFNF DPPPPVVVER TRVRRSISAE GLQNLNWLLK E

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.