Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020228 | Potato | cytosol | 97.47 | 80.42 |
| Solyc07g007220.2.1 | Tomato | nucleus | 83.23 | 68.67 |
| VIT_11s0118g00700.t01 | Wine grape | cytosol | 69.62 | 61.8 |
| KRH03568 | Soybean | cytosol | 73.1 | 60.31 |
| KRH20243 | Soybean | cytosol | 73.1 | 60.31 |
| GSMUA_Achr3P13350_001 | Banana | cytosol | 55.7 | 59.86 |
| KRH12874 | Soybean | cytosol | 69.62 | 58.05 |
| Os02t0799000-01 | Rice | cytosol, plastid | 63.61 | 56.78 |
| GSMUA_Achr7P20900_001 | Banana | nucleus | 64.24 | 56.7 |
| KRH37886 | Soybean | cytosol | 68.35 | 56.69 |
| TraesCS6A01G363900.1 | Wheat | cytosol | 62.66 | 56.25 |
| EER89322 | Sorghum | cytosol | 62.97 | 56.21 |
| TraesCS6B01G398500.1 | Wheat | cytosol | 62.03 | 55.68 |
| Os06t0179700-01 | Rice | cytosol, plastid | 62.03 | 54.44 |
| EES05962 | Sorghum | cytosol | 60.76 | 54.08 |
| Zm00001d045128_P001 | Maize | cytosol | 60.44 | 53.95 |
| TraesCS7A01G143200.2 | Wheat | cytosol | 60.13 | 53.82 |
| Zm00001d018394_P003 | Maize | endoplasmic reticulum, vacuole | 57.91 | 53.82 |
| TraesCS7D01G144400.3 | Wheat | cytosol | 59.49 | 53.26 |
| TraesCS7B01G045100.1 | Wheat | cytosol | 59.49 | 53.26 |
| HORVU7Hr1G029330.7 | Barley | plastid | 59.49 | 53.11 |
| Zm00001d052018_P001 | Maize | cytosol | 45.57 | 52.94 |
| HORVU6Hr1G086560.2 | Barley | mitochondrion | 62.66 | 50.9 |
| Solyc06g065610.2.1 | Tomato | plastid | 51.27 | 43.2 |
| Solyc01g068000.2.1 | Tomato | cytosol | 43.67 | 39.2 |
| Solyc04g082600.2.1 | Tomato | cytosol | 47.47 | 38.96 |
| Solyc06g009390.2.1 | Tomato | cytosol | 42.41 | 38.07 |
| Solyc02g082490.2.1 | Tomato | cytosol | 43.35 | 35.68 |
| Solyc05g053290.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 39.56 | 30.41 |
| Solyc12g042570.1.1 | Tomato | nucleus | 24.05 | 22.75 |
| Solyc08g006060.2.1 | Tomato | cytosol | 22.47 | 20.88 |
| Solyc03g118890.2.1 | Tomato | cytosol, nucleus, peroxisome | 18.67 | 19.47 |
| Solyc08g074230.1.1 | Tomato | cytosol, nucleus, peroxisome | 16.14 | 18.82 |
| Solyc01g056690.2.1 | Tomato | cytosol | 27.53 | 13.32 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:15.5.38 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K4DCD2 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF299 |
| SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:Solyc12g010450.1 | EnsemblPlants:Solyc12g010450.1.1 | UniParc:UPI0002769E5D | SEG:seg |
Description
No Description!
Coordinates
chr12:-:3471350..3475691
Molecular Weight (calculated)
34816.5 Da
IEP (calculated)
5.946
GRAVY (calculated)
-0.272
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MCVQDSEEVS EDMENLDISK TDCSEKIRSL QIESEFSNTH KEKFEKHSSS SYAVMRNSFP VFDGHGGKGA ALFVRDSLPR IIVEDADFPL KLEKVVSKSF
101: LETDAAFAKS CSLDSALSSG TTALTAMIFG RSLLVANAGD CRAVLSRGGL AIEMSKDHRP CCVNERTRVE SLGGFVDDGY LNGQLGVTRA LGNWHIKGLK
201: EADKGGPLSA EPELKLLTLT KEDEFLIIGS DGIWDVFRNQ NAVDFARRRL QEHNNVKLCC KEIVDEAKKR GAIDNLTVVM VCFHSEPPPP VVFQRSRIRK
301: CISAEGLQNL KSLLEG
101: LETDAAFAKS CSLDSALSSG TTALTAMIFG RSLLVANAGD CRAVLSRGGL AIEMSKDHRP CCVNERTRVE SLGGFVDDGY LNGQLGVTRA LGNWHIKGLK
201: EADKGGPLSA EPELKLLTLT KEDEFLIIGS DGIWDVFRNQ NAVDFARRRL QEHNNVKLCC KEIVDEAKKR GAIDNLTVVM VCFHSEPPPP VVFQRSRIRK
301: CISAEGLQNL KSLLEG
001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
Arabidopsis Description
AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.