Factsheet for Solyc03g118890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014727	Potato	peroxisome	93.4	83.73
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	66.34	63.61
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	73.6	58.99
KRH39122	Soybean	cytosol	61.72	57.54
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	64.03	55.27
EER98699	Sorghum	cytosol, peroxisome, plastid	63.37	53.33
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	62.71	52.78
HORVU5Hr1G055300.9	Barley	nucleus	62.71	52.78
CDY26191	Canola	cytosol	62.05	51.79
TraesCS5D01G185900.1	Wheat	nucleus	61.39	51.67
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	61.39	51.67
TraesCS5A01G181600.1	Wheat	nucleus	59.41	50.0
Bra025933.1-P	Field mustard	cytosol	62.38	49.48
Os09t0314400-01	Rice	mitochondrion	64.69	46.89
CDY19191	Canola	cytosol, nucleus, peroxisome	60.73	46.82
Solyc06g009390.2.1	Tomato	cytosol	26.07	22.44
Solyc08g006060.2.1	Tomato	cytosol	24.42	21.76
Solyc01g068000.2.1	Tomato	cytosol	25.08	21.59
Solyc12g042570.1.1	Tomato	nucleus	23.76	21.56
Solyc06g065610.2.1	Tomato	plastid	25.74	20.8
Solyc04g082600.2.1	Tomato	cytosol	24.09	18.96
Solyc07g007220.2.1	Tomato	nucleus	23.76	18.8
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	19.47	18.67
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	24.75	18.25
Solyc02g082490.2.1	Tomato	cytosol	23.1	18.23
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	12.87	14.39
Solyc01g056690.2.1	Tomato	cytosol	23.43	10.87

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005575	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:K4BM38	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc03g118890.2
EnsemblPlants:Solyc03g118890.2.1	TMHMM:TMhelix	UniParc:UPI00027661AD	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:67673643..67678540

Molecular Weight (calculated)

32956.6 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.364

Length

303 amino acids

Sequence
(BLAST)

001: MAESSDSTSL DKESVSTTAN NKREAHPDSS DSVTKKLRSS DTHDEPKTEI TVPKNGCELY FEIEADAAED KGSRHTMEDA SVVLPDAGLE FPGKLRCAHF
101: AIYDGHGGRL AAEYARKHLH DNVLSAGLPR ELLDIKAAKK AILEGFRRTD ESLLQESTKG GWQDGAAAVC VWVLGSKVFV ANIGDAKAIL ARSSPSDGSN
201: NTSDGSTPIK AIVLTREHKA IYPQERARIQ KAGGSVSSNG RLQARLEVSR AFGDRQFKKV GVIATPDVHS FDLTERDHFI ILGCDGLWGV SFVFFSSYFL
301: LFL

Best Arabidopsis Sequence Match ( AT1G18030.2 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: SVWTK

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.