Factsheet for Solyc07g007220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078867	Potato	nucleus	96.08	96.08
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	68.67	83.23
VIT_11s0118g00700.t01	Wine grape	cytosol	67.1	72.19
KRH03568	Soybean	cytosol	69.71	69.71
KRH20243	Soybean	cytosol	69.19	69.19
KRH12874	Soybean	cytosol	65.54	66.23
Os02t0799000-01	Rice	cytosol, plastid	60.31	65.25
GSMUA_Achr7P20900_001	Banana	nucleus	60.84	65.08
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	57.7	65.0
GSMUA_Achr3P13350_001	Banana	cytosol	49.61	64.63
TraesCS6A01G363900.1	Wheat	cytosol	59.27	64.49
EER89322	Sorghum	cytosol	59.53	64.41
KRH37886	Soybean	cytosol	63.71	64.04
TraesCS6B01G398500.1	Wheat	cytosol	58.49	63.64
Os06t0179700-01	Rice	cytosol, plastid	59.79	63.61
Zm00001d052018_P001	Maize	cytosol	44.91	63.24
EES05962	Sorghum	cytosol	58.49	63.1
TraesCS7A01G143200.2	Wheat	cytosol	57.96	62.89
Zm00001d045128_P001	Maize	cytosol	57.96	62.71
TraesCS7D01G144400.3	Wheat	cytosol	57.44	62.32
TraesCS7B01G045100.1	Wheat	cytosol	57.18	62.04
HORVU7Hr1G029330.7	Barley	plastid	57.18	61.86
HORVU6Hr1G086560.2	Barley	mitochondrion	59.27	58.35
Solyc06g065610.2.1	Tomato	plastid	46.74	47.73
Solyc01g068000.2.1	Tomato	cytosol	39.69	43.18
Solyc04g082600.2.1	Tomato	cytosol	42.56	42.34
Solyc06g009390.2.1	Tomato	cytosol	38.9	42.33
Solyc02g082490.2.1	Tomato	cytosol	39.16	39.06
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.77	33.33
Solyc12g042570.1.1	Tomato	nucleus	23.24	26.65
Solyc08g006060.2.1	Tomato	cytosol	22.19	25.0
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	18.8	23.76
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	14.1	19.93
Solyc01g056690.2.1	Tomato	cytosol	25.85	15.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CBJ3	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF299	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc07g007220.2	EnsemblPlants:Solyc07g007220.2.1	UniParc:UPI000276ABCD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:1957198..1960831

Molecular Weight (calculated)

42275.0 Da

IEP (calculated)

4.852

GRAVY (calculated)

-0.264

Length

383 amino acids

Sequence
(BLAST)

001: MCIQDSEQVN EGMENLAISN TDDNFKNQSL HSEAEFQHTQ NENCGKVTSS SPSVMRNSFP LESISEDTTI ADWKQILLSN FLPVLRSGDW SDIGGRVDME
101: DTHICIADLA KNFGLNILGE DAISFYGVFD GHGGKGASQF VRDYLPKIIV EDADFPLELE KVVTRSFAET DAAFAKSCYV DSALSSGTTA LTAMIFGRSL
201: LVANAGDCRA VVSRRGLAIE MSRDHRPCCV TERTRIESVG GFVDDGYLNG QLGVSRALGN WHIKGLKEVE KGGPLSAEPE LKLLTLTKED EFLIIGSDGI
301: WDVFRSQNAV DFARRRLQDH NNVKRCCKEM IDEAKKRGAI DNLTVVMVCF HSEPPPPVVF QRSRIRKSIS AEGLANLRSL LED

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.