Factsheet for Solyc12g042570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	60.78	60.6
Solyc08g006060.2.1	Tomato	cytosol	61.68	60.59
GSMUA_Achr4P12780_001	Banana	cytosol	62.57	58.71
VIT_09s0018g01140.t01	Wine grape	nucleus	61.68	57.54
KRH47317	Soybean	cytosol	62.87	57.07
KRH44580	Soybean	endoplasmic reticulum	62.57	56.79
EES04637	Sorghum	cytosol	59.88	55.71
Os02t0180000-01	Rice	cytosol, plasma membrane	60.18	55.52
Os06t0651600-01	Rice	cytosol	60.78	55.16
Zm00001d036710_P001	Maize	extracellular	59.28	54.25
EER90135	Sorghum	cytosol	58.38	53.28
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	43.11	53.14
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	17.37	52.73
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.58	52.37
TraesCS6D01G137200.1	Wheat	golgi	59.58	50.77
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	59.88	50.51
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	59.58	50.25
HORVU7Hr1G113110.1	Barley	cytosol	59.88	50.25
TraesCS7A01G504800.1	Wheat	cytosol	59.88	50.25
Zm00001d015504_P004	Maize	extracellular	60.18	50.12
Zm00001d046828_P003	Maize	cytosol	59.28	49.25
TraesCS7D01G492000.1	Wheat	nucleus	60.18	48.91
TraesCS7B01G411900.1	Wheat	cytosol	60.18	48.91
Zm00001d046831_P002	Maize	cytosol	58.38	47.91
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.77	46.67
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	21.86	45.91
GSMUA_Achr6P03990_001	Banana	plastid	58.68	43.27
Solyc06g065610.2.1	Tomato	plastid	28.44	25.33
Solyc01g068000.2.1	Tomato	cytosol	26.35	25.0
Solyc06g009390.2.1	Tomato	cytosol	25.45	24.15
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	22.75	24.05
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	21.56	23.76
Solyc07g007220.2.1	Tomato	nucleus	26.65	23.24
Solyc02g082490.2.1	Tomato	cytosol	26.65	23.18
Solyc04g082600.2.1	Tomato	cytosol	25.15	21.82
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.45	20.68
Solyc01g056690.2.1	Tomato	cytosol	24.85	12.71

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	UniProt:K4DF48	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:Solyc12g042570.1	EnsemblPlants:Solyc12g042570.1.1	UniParc:UPI000276AB2E	:	:

Description

No Description!

Coordinates

chr12:-:39942710..39956541

Molecular Weight (calculated)

36203.5 Da

IEP (calculated)

4.686

GRAVY (calculated)

-0.478

Length

334 amino acids

Sequence
(BLAST)

001: MQGWRATMED AHAVHPNLDS STSFFGVYDG HGGDEVSKFC AKFLHQEVLN HEAYSAGDID TSTRHAFLRM DEMMCGQTGQ RELASLMAEK DQAKNMIEGL
101: ISPPKYGESK GQTDGGSSEE GANSDYRGPS AGSTACIAII QNVQLLVANA GDSRCVLSRK GQAYDMSSDH KPDLQAEKER IRNAGGYVRC GRVNGTLNMS
201: RAIGDMELKQ NKSLPAEKQI VTANPDICTV ELCNDDDFLV LACDGIWDCM SSQEVVDFVG KQLKHENRLS AVCETVMDKC LAPATGGEGC DNMTMILVQF
301: KKPFKISTSN EEQPLASNQN SVCNGSTATS NDMP

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.