Factsheet for Zm00001d015504_P004

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04637	Sorghum	cytosol	86.03	96.1
Os02t0180000-01	Rice	cytosol, plasma membrane	76.31	84.53
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	76.06	80.26
GSMUA_Achr4P12780_001	Banana	cytosol	71.07	80.06
KRH61652	Soybean	cytosol	37.66	78.24
TraesCS6D01G137200.1	Wheat	golgi	76.31	78.06
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	76.56	77.53
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	76.31	77.27
Zm00001d036710_P001	Maize	extracellular	70.32	77.26
KRH52312	Soybean	cytosol	66.08	76.81
CDX72331	Canola	cytosol	66.33	75.57
CDY13457	Canola	cytosol	66.33	75.57
GSMUA_Achr10P...	Banana	cytosol	62.84	75.22
KRH15637	Soybean	cytosol	61.85	73.16
AT4G31860.1	Thale cress	cytosol	64.34	72.27
AT2G25070.2	Thale cress	nucleus	63.59	71.83
CDX76775	Canola	nucleus	63.59	71.43
Zm00001d046828_P003	Maize	cytosol	71.32	71.14
Solyc08g006060.2.1	Tomato	cytosol	60.1	70.88
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	69.08	70.48
Bra023979.1-P	Field mustard	cytosol	65.84	70.4
KRH05380	Soybean	golgi	61.1	68.82
Bra032043.1-P	Field mustard	nucleus	62.34	68.68
CDY53471	Canola	nucleus	62.09	68.41
Zm00001d046831_P002	Maize	cytosol	69.33	68.3
KRH44580	Soybean	endoplasmic reticulum	62.59	68.21
Bra007820.1-P	Field mustard	nucleus	63.09	68.01
CDY64720	Canola	nucleus	61.85	67.95
CDY64719	Canola	nucleus	61.85	67.95
KRH47317	Soybean	cytosol	61.85	67.39
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	43.64	64.58
Zm00001d021390_P001	Maize	cytosol	58.1	64.19
CDY34740	Canola	nucleus	63.09	63.89
VIT_09s0018g01140.t01	Wine grape	nucleus	56.36	63.13
KRH61653	Soybean	cytosol	21.2	62.5
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	16.96	61.82
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	23.94	60.38
Solyc12g042570.1.1	Tomato	nucleus	50.12	60.18
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.71	55.83
GSMUA_Achr6P03990_001	Banana	plastid	61.6	54.53
Zm00001d025780_P001	Maize	cytosol	35.41	38.9
Zm00001d052018_P001	Maize	cytosol	19.7	29.04
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	22.69	26.76
Zm00001d046450_P001	Maize	cytosol, plastid	23.69	26.39
Zm00001d045128_P001	Maize	cytosol	22.69	25.71
Zm00001d000391_P002	Maize	plastid	23.19	25.0
Zm00001d029772_P001	Maize	plastid	22.94	24.53
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	21.2	23.61
Zm00001d008171_P001	Maize	cytosol	23.19	23.48
Zm00001d024732_P001	Maize	cytosol	22.44	22.22
Zm00001d009364_P001	Maize	cytosol	23.44	19.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	UniProt:A0A1D6H2J0	ProteinID:AQK69065.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0008438B4C	EnsemblPlantsGene:Zm00001d015504	EnsemblPlants:Zm00001d015504_P004	EnsemblPlants:Zm00001d015504_T004
SEG:seg	:	:	:	:	:

Description

Protein phosphatase 2C isoform gamma

Coordinates

chr5:+:94160719..94167041

Molecular Weight (calculated)

43794.1 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.232

Length

401 amino acids

Sequence
(BLAST)

001: MGVYLSTPKT DKLSENGEND RLKFGLSSMQ GWRATMEDAV SFLIKAINII LFALAGVKLR SPIDYPVHEG CNFVMSGALR LHSALLDLDS ETAFFGVFDG
101: HGGRVVAKFC AKYLHGQVLK SEAYSTGDLG TAVHRAFFRM DEMMQGQRGW RELSALGDKI NKFSGMIEGL IWSPRGSDSN NQQDDWASEE GPHSDFAGPT
201: CGSTACVALI RNTQLVVANA GDSRCVISRG GKAYNLSRDH KPELAAERER IMKAGGFIHM GRVNGSLNLS RAIGDVELKQ NKFLPPEKQI VTANPDINVV
301: ELCDDDDFVV VACDGIWDCM SSQQLVDFIH ERINTESSLS AVCERVLDRC LAPSTIAGDG CDNMTMILVQ FKKPVDRNKK AEAAGQSASN VDEAKSRVAE
401: E

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.