Factsheet for Zm00001d046450_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88596	Sorghum	cytosol, plastid	93.06	93.06
Os06t0597200-01	Rice	cytosol	86.39	84.74
TraesCS7A01G371100.1	Wheat	plastid	80.56	80.56
HORVU7Hr1G085010.2	Barley	plastid	81.11	80.0
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	80.28	79.83
TraesCS7D01G351600.1	Wheat	cytosol, plastid	80.28	78.96
GSMUA_Achr7P08470_001	Banana	cytosol	72.5	68.15
VIT_04s0008g04780.t01	Wine grape	cytosol	69.17	65.53
KRH61828	Soybean	cytosol	67.22	65.41
GSMUA_Achr10P...	Banana	cytosol	69.72	65.36
KRH52505	Soybean	cytosol	66.94	65.14
Solyc06g065610.2.1	Tomato	plastid	67.5	64.8
PGSC0003DMT400067098	Potato	cytosol, plastid	66.67	64.0
AT2G25620.2	Thale cress	nucleus	63.61	58.42
CDY11515	Canola	mitochondrion	61.39	58.16
CDX76745	Canola	nucleus	62.78	57.65
Bra007784.1-P	Field mustard	nucleus	62.5	57.4
Zm00001d045128_P001	Maize	cytosol	50.56	51.41
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	48.33	51.18
Zm00001d052018_P001	Maize	cytosol	38.33	50.74
Zm00001d029772_P001	Maize	plastid	51.67	49.6
Zm00001d000391_P002	Maize	plastid	51.11	49.46
Zm00001d008171_P001	Maize	cytosol	42.5	38.64
Zm00001d024732_P001	Maize	cytosol	42.78	38.02
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	9.17	30.0
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	12.78	28.93
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	9.17	27.5
Zm00001d021390_P001	Maize	cytosol	26.94	26.72
Zm00001d036710_P001	Maize	extracellular	26.39	26.03
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	25.28	25.28
Zm00001d046828_P003	Maize	cytosol	27.5	24.63
Zm00001d025780_P001	Maize	cytosol	24.72	24.38
Zm00001d046831_P002	Maize	cytosol	26.94	23.83
Zm00001d015504_P004	Maize	extracellular	26.39	23.69
Zm00001d009364_P001	Maize	cytosol	28.89	21.71

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100193064	MapMan:15.5.38	Gene3D:3.60.40.10	ProteinID:AQL04309.1
UniProt:B4FDN2	EMBL:BT035220	EMBL:EU967020	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	GO:GO:0050688	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00017B64D6	EnsemblPlantsGene:Zm00001d046450
EnsemblPlants:Zm00001d046450_P001	EnsemblPlants:Zm00001d046450_T001	SEG:seg	:	:	:

Description

DBP-transcription factor 4Probable protein phosphatase 2C 22

Coordinates

chr9:-:90491829..90495556

Molecular Weight (calculated)

39095.4 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.206

Length

360 amino acids

Sequence
(BLAST)

001: MEEHVPRGGG GGRPPIPAAA ARKPALARHS SFVRSPANNT KPATERAFEG MDTEFIPIVR SGGWADIGSR HTMEDVFICF DNFMQDFGIE SFEEGPSAFY
101: GIFDGHGGKH AADFVCSNLP RFIVEDEDFP REIVKAMSSA FLQADASFAD ACSLNCSLSS GTTALAALVV GRSLLVANAG DCRAVLCRRG KAIEMSRDHK
201: PSCNREKIRI EALGGYVDDG YLNGQLNVAR AIGDWHMEGM KACGGLGPLT AEPEVMTMDL TDEDEFLIMG CDGIWDVFLS QNAVDFARRK LQEHNDPAAC
301: CKELVDEAIK RKSGDNLSVV VVCFNSRPPP VLTTPRPRVQ RSISAEGLRE LQSFLDSLAD

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.