Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11515 | Canola | mitochondrion | 86.48 | 89.21 |
| AT2G25620.2 | Thale cress | nucleus | 86.48 | 86.48 |
| KRH52505 | Soybean | cytosol | 64.8 | 68.65 |
| KRH61828 | Soybean | cytosol | 64.54 | 68.38 |
| VIT_04s0008g04780.t01 | Wine grape | cytosol | 65.56 | 67.63 |
| PGSC0003DMT400067098 | Potato | cytosol, plastid | 61.73 | 64.53 |
| Solyc06g065610.2.1 | Tomato | plastid | 60.71 | 63.47 |
| EER88596 | Sorghum | cytosol, plastid | 57.91 | 63.06 |
| TraesCS7A01G371100.1 | Wheat | plastid | 57.91 | 63.06 |
| Zm00001d046450_P001 | Maize | cytosol, plastid | 57.65 | 62.78 |
| TraesCS7B01G256300.1 | Wheat | mitochondrion, plastid | 57.91 | 62.71 |
| TraesCS7D01G351600.1 | Wheat | cytosol, plastid | 57.91 | 62.02 |
| HORVU7Hr1G085010.2 | Barley | plastid | 57.65 | 61.92 |
| Os06t0597200-01 | Rice | cytosol | 57.65 | 61.58 |
| GSMUA_Achr7P08470_001 | Banana | cytosol | 58.67 | 60.05 |
| GSMUA_Achr10P... | Banana | cytosol | 57.91 | 59.11 |
| CDY16304 | Canola | nucleus | 43.88 | 48.45 |
| CDY33277 | Canola | nucleus | 43.88 | 48.18 |
| CDX78007 | Canola | nucleus | 43.62 | 47.37 |
| CDX73719 | Canola | nucleus | 43.37 | 47.09 |
| CDY17190 | Canola | cytosol | 44.13 | 46.13 |
| CDY53789 | Canola | cytosol | 45.15 | 45.97 |
| CDY37699 | Canola | cytosol | 44.9 | 45.6 |
| CDY27953 | Canola | cytosol | 44.13 | 45.29 |
| CDX93981 | Canola | cytosol | 40.56 | 42.29 |
| CDY11411 | Canola | cytosol | 40.31 | 42.25 |
| CDX76624 | Canola | cytosol | 40.31 | 42.13 |
| CDY37787 | Canola | cytosol | 38.27 | 40.87 |
| CDY20937 | Canola | cytosol | 36.48 | 38.34 |
| CDX93640 | Canola | cytosol | 35.97 | 37.6 |
| CDX95863 | Canola | golgi, mitochondrion | 36.73 | 34.37 |
| CDX92122 | Canola | mitochondrion | 26.02 | 30.18 |
| CDX72331 | Canola | cytosol | 24.74 | 27.56 |
| CDY13457 | Canola | cytosol | 24.49 | 27.27 |
| CDX76775 | Canola | nucleus | 24.74 | 27.17 |
| CDY64720 | Canola | nucleus | 24.49 | 26.3 |
| CDY64719 | Canola | nucleus | 24.49 | 26.3 |
| CDY53471 | Canola | nucleus | 24.23 | 26.1 |
| CDY26191 | Canola | cytosol | 22.7 | 24.52 |
| CDY34740 | Canola | nucleus | 24.49 | 24.24 |
| CDY66303 | Canola | plastid | 38.78 | 24.09 |
| CDY19191 | Canola | cytosol, nucleus, peroxisome | 21.94 | 21.88 |
| CDY26194 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.71 | 19.0 |
| CDY22485 | Canola | cytosol | 26.28 | 15.68 |
| CDY35434 | Canola | cytosol, plastid | 26.02 | 15.53 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:15.5.38 | Gene3D:3.60.40.10 | GO:A0A078CIM9 | EnsemblPlants:CDX76745 |
| ProteinID:CDX76745 | ProteinID:CDX76745.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0043169 | EnsemblPlantsGene:GSBRNA2T00127234001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF346 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EE2712 | SEG:seg |
Description
BnaC08g33310D
Coordinates
chrLK031808:+:799430..801152
Molecular Weight (calculated)
42775.5 Da
IEP (calculated)
4.914
GRAVY (calculated)
-0.374
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDTKGISDP ENGSSIYGGK PPNPLSFSSS SSSAAALYRQ TFDGDRDRDR FLAPRSLVRH PSLVKTKVSA LSVENEFALD KVEFVPAMRS GAWSDIGSRS
101: SMEDAYLCLD SLMDSYGLKD SEDGPTAFYG VFDGHGGKHA AEFACQRIPR YIVEDQEFPS DINKVMSSAF LQTDVAFSEA CALDGSLSSG TTALAAILTG
201: RSLVVANAGD CRAVLSRQGK AIEMSKDHKP MSCKERRRIE ASGGYIYDGY LNGQLNVARA IGDFHMEGMK RKKDGSNGGP LIADPELMTT KLTEEDEFLI
301: MGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSGDNVT AVVVCLQPQP PPNLVAPRLR VQRSFSAEGL KDLQSYLDDL GC
101: SMEDAYLCLD SLMDSYGLKD SEDGPTAFYG VFDGHGGKHA AEFACQRIPR YIVEDQEFPS DINKVMSSAF LQTDVAFSEA CALDGSLSSG TTALAAILTG
201: RSLVVANAGD CRAVLSRQGK AIEMSKDHKP MSCKERRRIE ASGGYIYDGY LNGQLNVARA IGDFHMEGMK RKKDGSNGGP LIADPELMTT KLTEEDEFLI
301: MGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSGDNVT AVVVCLQPQP PPNLVAPRLR VQRSFSAEGL KDLQSYLDDL GC
001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
Arabidopsis Description
AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.