CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007820.1-P	Field mustard	nucleus	99.44	95.43
AT2G25070.2	Thale cress	nucleus	93.84	94.37
CDY53471	Canola	nucleus	93.0	91.21
CDY64719	Canola	nucleus	93.0	90.96
CDY64720	Canola	nucleus	93.0	90.96
CDY34740	Canola	nucleus	93.56	84.34
CDY13457	Canola	cytosol	81.79	82.95
CDX72331	Canola	cytosol	81.23	82.39
KRH61652	Soybean	cytosol	42.58	78.76
KRH52312	Soybean	cytosol	74.23	76.81
KRH15637	Soybean	cytosol	72.55	76.4
GSMUA_Achr4P12780_001	Banana	cytosol	73.67	73.88
GSMUA_Achr10P...	Banana	cytosol	68.91	73.43
KRH05380	Soybean	golgi	72.27	72.47
Os02t0180000-01	Rice	cytosol, plasma membrane	72.55	71.55
EES04637	Sorghum	cytosol	71.15	70.75
Os06t0651600-01	Rice	cytosol	69.47	67.39
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.15	66.84
Zm00001d036710_P001	Maize	extracellular	67.51	66.03
EER90135	Sorghum	cytosol	66.67	65.03
TraesCS6D01G137200.1	Wheat	golgi	71.15	64.8
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	71.43	64.39
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	71.15	64.14
KRH61653	Soybean	cytosol	24.37	63.97
Zm00001d015504_P004	Maize	extracellular	71.43	63.59
HORVU7Hr1G113110.1	Barley	cytosol	70.87	63.57
TraesCS7A01G504800.1	Wheat	cytosol	70.31	63.07
TraesCS7D01G492000.1	Wheat	nucleus	70.31	61.07
TraesCS7B01G411900.1	Wheat	cytosol	70.03	60.83
Zm00001d046828_P003	Maize	cytosol	66.95	59.45
Zm00001d046831_P002	Maize	cytosol	65.55	57.49
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	16.81	54.55
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	23.81	53.46
GSMUA_Achr6P03990_001	Banana	plastid	67.79	53.42
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	17.09	50.83
CDY33277	Canola	nucleus	28.01	28.01
CDY17190	Canola	cytosol	28.85	27.47
CDY16304	Canola	nucleus	27.17	27.32
CDX78007	Canola	nucleus	27.17	26.87
CDX73719	Canola	nucleus	26.89	26.59
CDY37699	Canola	cytosol	28.57	26.42
CDY27953	Canola	cytosol	28.01	26.18
CDY11515	Canola	mitochondrion	27.45	25.79
CDY20937	Canola	cytosol	26.89	25.74
CDY53789	Canola	cytosol	27.45	25.45
CDX93640	Canola	cytosol	26.61	25.33
CDX76745	Canola	nucleus	27.17	24.74
CDY26191	Canola	cytosol	24.65	24.24
CDY37787	Canola	cytosol	24.37	23.71
CDY11411	Canola	cytosol	24.65	23.53
CDX76624	Canola	cytosol	24.65	23.47
CDX93981	Canola	cytosol	24.09	22.87
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.73	22.17
CDY19191	Canola	cytosol, nucleus, peroxisome	23.81	21.63
CDX95863	Canola	golgi, mitochondrion	24.93	21.24
CDX92122	Canola	mitochondrion	16.25	17.16
CDY66303	Canola	plastid	26.33	14.9
CDY35434	Canola	cytosol, plastid	26.33	14.31
CDY22485	Canola	cytosol	26.05	14.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:A0A078CIQ7	EnsemblPlants:CDX76775	ProteinID:CDX76775
ProteinID:CDX76775.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00127270001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EF4C1E	SEG:seg

Description

BnaC08g33610D

Coordinates

chrLK031808:+:1006612..1009109

Molecular Weight (calculated)

39435.2 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.559

Length

357 amino acids

Sequence
(BLAST)

001: MGTYLSSPKT DKLSEEGEND KLRYGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVLSNE AYGAGDIETS LQRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDANNQ PDNWPLEDGP HSDFAGPTSG CTACVALIKD KKLFVANAGD SRCVISRKGQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTLDL CDDDDFLVVA CDGIWDCMSS QQLVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTASGEGCD NMTIILVQFK KSNNPSEPEP EEETKPEPSQ DEPSSSS

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.