CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014405.1-P	Field mustard	cytosol	74.01	100.0
CDX93981	Canola	cytosol	53.72	90.16
CDX76624	Canola	cytosol	50.55	85.07
CDY11411	Canola	cytosol	50.4	85.03
AT3G62260.2	Thale cress	cytosol	45.48	74.74
CDY37787	Canola	cytosol	39.14	67.3
GSMUA_AchrUn_...	Banana	cytosol	27.89	59.66
Os05t0134200-01	Rice	cytosol	34.23	55.53
GSMUA_Achr8P22250_001	Banana	cytosol	32.33	55.28
Os01t0295700-01	Rice	cytosol	32.81	54.47
Zm00001d008171_P001	Maize	cytosol	34.07	54.29
GSMUA_Achr10P...	Banana	cytosol	34.39	54.25
HORVU1Hr1G016640.2	Barley	cytosol	32.65	53.93
TraesCS1D01G079600.1	Wheat	cytosol	32.49	53.66
TraesCS1A01G077500.1	Wheat	cytosol	32.65	53.65
EES17660	Sorghum	cytosol, peroxisome, plastid	34.07	53.62
GSMUA_Achr3P08410_001	Banana	cytosol	34.55	53.43
TraesCS1B01G095600.1	Wheat	cytosol	32.49	53.39
TraesCS5D01G089900.1	Wheat	cytosol	32.17	53.14
TraesCS5B01G082500.1	Wheat	cytosol	32.17	53.0
EES02832	Sorghum	cytosol	33.6	52.87
TraesCS5A01G076600.1	Wheat	cytosol	32.17	52.86
Zm00001d024732_P001	Maize	cytosol	33.76	52.59
HORVU5Hr1G020300.3	Barley	plastid	30.74	50.13
CDX93640	Canola	cytosol	29.64	49.87
CDY20937	Canola	cytosol	29.16	49.33
CDY16304	Canola	nucleus	24.72	43.94
CDX73719	Canola	nucleus	25.04	43.77
CDY17190	Canola	cytosol	25.99	43.73
CDY33277	Canola	nucleus	24.72	43.7
CDX78007	Canola	nucleus	24.88	43.49
CDX95863	Canola	golgi, mitochondrion	28.84	43.44
CDY27953	Canola	cytosol	25.99	42.93
CDY37699	Canola	cytosol	26.15	42.75
CDY53789	Canola	cytosol	25.67	42.08
CDY11515	Canola	mitochondrion	23.93	39.74
CDX76745	Canola	nucleus	24.09	38.78
CDX92122	Canola	mitochondrion	20.76	38.76
CDY13457	Canola	cytosol	14.9	26.7
CDX72331	Canola	cytosol	14.9	26.7
CDX76775	Canola	nucleus	14.9	26.33
CDY53471	Canola	nucleus	14.58	25.27
CDY64720	Canola	nucleus	14.58	25.21
CDY64719	Canola	nucleus	14.58	25.21
CDY26191	Canola	cytosol	13.47	23.42
CDY34740	Canola	nucleus	14.42	22.98
CDY19191	Canola	cytosol, nucleus, peroxisome	13.47	21.63
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.66	19.0
CDY22485	Canola	cytosol	16.64	15.98
CDY35434	Canola	cytosol, plastid	15.85	15.22

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078JFG2	UniProt:A0A078JFG2
EnsemblPlants:CDY66303	ProteinID:CDY66303	ProteinID:CDY66303.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00053339001
InterPro:HAD-SF_hydro_IG_5-nucl	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	PFAM:PF05761	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF519	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EDF435	SEG:seg

Description

BnaA04g27290DBnaA04g27290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFG2]

Coordinates

chrLK035188:-:13904..18865

Molecular Weight (calculated)

69106.3 Da

IEP (calculated)

5.885

GRAVY (calculated)

-0.046

Length

631 amino acids

Sequence
(BLAST)

001: MVAEAEVVFR QISSAVISPL SSPKLGIRRS TASVSGGLST SPVVSINLSE NTLSKAYHDS SVPVYVPTIR SGSYADIGPK RFMEDEHICV DDLSSQVSCL
101: SQLPNPSAFY AVFDGHGGSE AATYVKQNAI RLFFEDEKFP QTSEVNNSVY VEEVRSSLRN AFLQADLALA EDCSISSSSG TTALAALISG RLLMVANAGD
201: CRAVLCRKGR AIEMSHDHRP INLLERRRVE KSGGVFEDGY LNGELSVTRA LGDWDMKRTP RGSSKSPLIS EPEIKQTTLT EDDEFLVMAC DGIWDVLTSQ
301: EAVSIVKRGL NRHDDPGRCA RELVMEALRL NTFDNLTAVV VSFVTGERVV PLEKKRCFGL TPEAFRSLRI FRPDELSALI SSFKPSHRTA GLIFSLRSIA
401: TSDLLLHHLS VPVTDSSILD SLCFPSSPSP SIIAAPLTDE QLGFLQLAVL VHSTTNASGN CQTSLPCNLK VDVLYFGLIC KEVAKVVPAQ TLAATNLADQ
501: ELTETMQKLL IVMQRLDDKI GLMLESDGEL FNRRWGFFSR AGLWDKSHLM RQIEKYADIY THQESPTSST THPSCISAHK SSMSSKLISG DSDFFANLVC
601: FHFSSLCSQS ISAIEFPSRL WDPFIISCNS G

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.