CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032043.1-P	Field mustard	nucleus	99.45	99.45
CDY64719	Canola	nucleus	97.25	96.99
CDY64720	Canola	nucleus	97.25	96.99
CDX76775	Canola	nucleus	91.21	93.0
AT2G25070.2	Thale cress	nucleus	88.74	90.99
CDY13457	Canola	cytosol	78.02	80.68
CDX72331	Canola	cytosol	77.47	80.11
CDY34740	Canola	nucleus	85.99	79.04
KRH61652	Soybean	cytosol	40.66	76.68
KRH52312	Soybean	cytosol	71.15	75.07
KRH15637	Soybean	cytosol	69.51	74.63
GSMUA_Achr4P12780_001	Banana	cytosol	70.33	71.91
GSMUA_Achr10P...	Banana	cytosol	65.66	71.34
KRH05380	Soybean	golgi	69.23	70.79
Os02t0180000-01	Rice	cytosol, plasma membrane	68.96	69.34
EES04637	Sorghum	cytosol	67.31	68.25
Os06t0651600-01	Rice	cytosol	67.86	67.12
Zm00001d036710_P001	Maize	extracellular	66.48	66.3
EER90135	Sorghum	cytosol	66.21	65.85
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.13	65.26
HORVU7Hr1G113110.1	Barley	cytosol	69.51	63.57
TraesCS7A01G504800.1	Wheat	cytosol	68.96	63.07
TraesCS6D01G137200.1	Wheat	golgi	67.86	63.01
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	68.13	62.63
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	67.86	62.37
Zm00001d015504_P004	Maize	extracellular	68.41	62.09
KRH61653	Soybean	cytosol	23.08	61.76
TraesCS7D01G492000.1	Wheat	nucleus	69.51	61.56
TraesCS7B01G411900.1	Wheat	cytosol	69.23	61.31
Zm00001d046828_P003	Maize	cytosol	65.93	59.7
Zm00001d046831_P002	Maize	cytosol	64.56	57.74
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	16.21	53.64
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	23.08	52.83
GSMUA_Achr6P03990_001	Banana	plastid	64.84	52.1
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.48	50.0
CDY33277	Canola	nucleus	26.65	27.17
CDY20937	Canola	cytosol	27.75	27.08
CDY16304	Canola	nucleus	26.1	26.76
CDY17190	Canola	cytosol	27.47	26.67
CDX93640	Canola	cytosol	27.47	26.67
CDX78007	Canola	nucleus	25.82	26.04
CDX73719	Canola	nucleus	25.55	25.76
CDY27953	Canola	cytosol	26.65	25.39
CDY37699	Canola	cytosol	26.92	25.39
CDY11515	Canola	mitochondrion	26.37	25.26
CDY53789	Canola	cytosol	26.37	24.94
CDY26191	Canola	cytosol	24.45	24.52
CDX76745	Canola	nucleus	26.1	24.23
CDY11411	Canola	cytosol	24.45	23.8
CDX76624	Canola	cytosol	24.45	23.73
CDY37787	Canola	cytosol	23.9	23.71
CDX93981	Canola	cytosol	23.35	22.61
CDX95863	Canola	golgi, mitochondrion	25.55	22.2
CDY19191	Canola	cytosol, nucleus, peroxisome	23.63	21.88
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.19	21.72
CDX92122	Canola	mitochondrion	16.21	17.46
CDY66303	Canola	plastid	25.27	14.58
CDY35434	Canola	cytosol, plastid	25.27	14.0
CDY22485	Canola	cytosol	25.0	13.85

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:A0A078IUF5	UniProt:A0A078IUF5	EnsemblPlants:CDY53471
ProteinID:CDY53471	ProteinID:CDY53471.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00010792001	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EDBFA3	SEG:seg	:	:	:

Description

BnaA04g28120DBnaA04g28120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUF5]

Coordinates

chrLK033206:-:59636..61857

Molecular Weight (calculated)

40188.0 Da

IEP (calculated)

4.445

GRAVY (calculated)

-0.556

Length

364 amino acids

Sequence
(BLAST)

001: MGTYLSSPKT EKLSEEGEND TLRYGLSSMQ GWRATMEDAH AAILDVDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVLSNQ AYGAGDIETS LQRAFFRMDD
101: MMQGQRGWRE LAALGDKMNK FSGMIEGFIW SPRSGGDVNN QPDNWPLEDG PHSDFTGPNC GCTACVALIK DKKLFVANAG DSRCVISRKG QAYDLSKDHK
201: PDLEAEKERI LNAGGFIHAG RINGSLNLTR AIGDMEFKQN KFLSSDKQMV TANPDINTID LCDDDDFLVV ACDGIWDCMT SQQLVDFIHE QLKSETKLST
301: VCEKIVDRCL APDTASGEGC DNMTIILIQF KKPNPSETEA EEAKEEEVKQ EPSQEAQDEP SSSS

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.