Factsheet for Bra032043.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53471	Canola	nucleus	99.45	99.45
AT2G25070.2	Thale cress	nucleus	89.01	91.27
Bra007820.1-P	Field mustard	nucleus	91.21	89.25
KRH61652	Soybean	cytosol	40.66	76.68
Bra023979.1-P	Field mustard	cytosol	77.75	75.47
KRH52312	Soybean	cytosol	70.88	74.78
KRH15637	Soybean	cytosol	69.23	74.34
GSMUA_Achr4P12780_001	Banana	cytosol	70.6	72.19
GSMUA_Achr10P...	Banana	cytosol	65.93	71.64
KRH05380	Soybean	golgi	68.96	70.51
Os02t0180000-01	Rice	cytosol, plasma membrane	69.23	69.61
EES04637	Sorghum	cytosol	67.58	68.52
Os06t0651600-01	Rice	cytosol	67.58	66.85
Zm00001d036710_P001	Maize	extracellular	66.76	66.58
EER90135	Sorghum	cytosol	65.93	65.57
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.41	65.53
HORVU7Hr1G113110.1	Barley	cytosol	69.23	63.32
TraesCS6D01G137200.1	Wheat	golgi	68.13	63.27
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	68.41	62.88
TraesCS7A01G504800.1	Wheat	cytosol	68.68	62.81
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	68.13	62.63
KRH61653	Soybean	cytosol	23.35	62.5
Zm00001d015504_P004	Maize	extracellular	68.68	62.34
TraesCS7D01G492000.1	Wheat	nucleus	69.23	61.31
TraesCS7B01G411900.1	Wheat	cytosol	68.96	61.07
Zm00001d046828_P003	Maize	cytosol	65.66	59.45
Zm00001d046831_P002	Maize	cytosol	64.29	57.49
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	16.48	54.55
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	23.35	53.46
GSMUA_Achr6P03990_001	Banana	plastid	65.11	52.32
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.76	50.83
Bra036796.1-P	Field mustard	nucleus	24.45	28.25
Bra038901.1-P	Field mustard	nucleus	26.65	27.17
Bra005481.1-P	Field mustard	cytosol	27.47	26.6
Bra018701.1-P	Field mustard	cytosol	27.2	26.4
Bra007784.1-P	Field mustard	nucleus	26.37	24.49
Bra021870.1-P	Field mustard	endoplasmic reticulum	26.37	23.94
Bra007669.1-P	Field mustard	cytosol	24.45	23.8
Bra025933.1-P	Field mustard	cytosol	24.18	23.04
Bra022205.1-P	Field mustard	mitochondrion	13.46	18.56
Bra014405.1-P	Field mustard	cytosol	23.63	18.42
Bra000209.1-P	Field mustard	cytosol	25.0	13.89

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	EnsemblPlantsGene:Bra032043	EnsemblPlants:Bra032043.1	EnsemblPlants:Bra032043.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4ETB3	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002544D41
SEG:seg	:	:	:	:	:

Description

AT2G25070 (E=2e-174) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA04:-:11275990..11277551

Molecular Weight (calculated)

40170.0 Da

IEP (calculated)

4.445

GRAVY (calculated)

-0.565

Length

364 amino acids

Sequence
(BLAST)

001: MGTYLSSPKT EKLSEEGEND TLRYGLSSMQ GWRATMEDAH AAILDVDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVLSNQ AYGAGDIETS LQRAFFRMDD
101: MMQGQRGWRE LAALGDKMNK FSGMIEGFIW SPRSGGDVNN QPDNWPLEDG PHSDFTGPNC GCTACVALIK DKKLFVANAG DSRCVISRKG QAYDLSKDHK
201: PDLEAEKERI LNAGGFIHAG RINGSLNLTR AIGDMEFKQN KFLPSDKQMV TANPDINTID LCDDDDFLVV ACDGIWDCMT SQQLVDFIHE QLKSETKLST
301: VCEKIVDRCL APDTASGEGC DNMTIILIQF KKPNPSETEA EEAKEEEAKQ EPSQEAQDEP SSSS

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.