Factsheet for Bra036796.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78007	Canola	nucleus	99.37	86.7
CDX73719	Canola	nucleus	98.41	85.87
AT3G51470.1	Thale cress	nucleus	93.02	81.16
Bra038901.1-P	Field mustard	nucleus	90.79	80.11
VIT_07s0031g02160.t01	Wine grape	cytosol	75.87	66.2
PGSC0003DMT400059610	Potato	cytosol	74.29	63.07
KRH28935	Soybean	nucleus	74.6	62.83
KRH76528	Soybean	cytosol	74.29	62.57
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	72.06	59.11
GSMUA_Achr11P...	Banana	plastid	69.52	58.87
Solyc02g082490.2.1	Tomato	cytosol	71.75	58.85
GSMUA_Achr4P25900_001	Banana	cytosol	68.25	56.28
TraesCS1A01G202300.1	Wheat	plastid	66.03	56.22
GSMUA_Achr9P23890_001	Banana	plastid	66.67	56.0
TraesCS1B01G216500.1	Wheat	plastid	65.4	55.68
KXG39006	Sorghum	plastid	65.71	55.65
TraesCS1D01G205700.1	Wheat	plastid	65.08	55.41
Zm00001d000391_P002	Maize	plastid	65.08	55.11
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	66.98	55.09
Bra005481.1-P	Field mustard	cytosol	65.71	55.05
Zm00001d029772_P001	Maize	plastid	65.08	54.67
Bra021870.1-P	Field mustard	endoplasmic reticulum	67.94	53.37
HORVU1Hr1G052160.1	Barley	plastid	65.08	51.38
GSMUA_AchrUn_...	Banana	cytosol	68.25	47.88
Bra007669.1-P	Field mustard	cytosol	49.84	41.98
Bra007784.1-P	Field mustard	nucleus	51.11	41.07
Bra018701.1-P	Field mustard	cytosol	44.76	37.6
Bra014405.1-P	Field mustard	cytosol	44.44	29.98
Bra022205.1-P	Field mustard	mitochondrion	23.49	28.03
Bra025933.1-P	Field mustard	cytosol	30.16	24.87
Bra007820.1-P	Field mustard	nucleus	28.89	24.46
Bra032043.1-P	Field mustard	nucleus	28.25	24.45
Bra023979.1-P	Field mustard	cytosol	28.25	23.73
Bra000209.1-P	Field mustard	cytosol	30.79	14.81

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra036796
EnsemblPlants:Bra036796.1	EnsemblPlants:Bra036796.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4F6T6	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF304	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002542CDC	SEG:seg	:	:	:

Description

AT3G51470 (E=7e-150) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA09:-:25759980..25761376

Molecular Weight (calculated)

34579.2 Da

IEP (calculated)

5.895

GRAVY (calculated)

-0.392

Length

315 amino acids

Sequence
(BLAST)

001: MTQEGEERFG LKSPEGQNST WEPVFRSGSW SDKGPKRSME DEFICVDDLK DHIGSSTGAF YGVFDGHGGV DAALFTKKNL LKLLTEDKHF PTNTKKATRS
101: AFVKTDHALA DAPSLDKSSG TTALTALILD KTMLIANAGD SRAVLGKRGR AIELSKDHKP NCTSERLRIE KLGGVIYDGY LNGQLSVARA LGDWHIKGTK
201: GSLCPLSCEP ELEEIVLAEE DEYLIMGCDG LWDVMSSQCA VTMVRRELMQ HNDPEKCSQA LVKEALQRNS CDNLTVVVVC FSPEPPPRIE IPKSHKRRSI
301: SAEGLDLLKG VLNDL

Best Arabidopsis Sequence Match ( AT3G51470.2 )
(BLAST)

001: MICLQEGDER FGAKSPEGVN STFQPVFRSG SWSDKGPKQS MEDEFICVDD LTEYIGSSTG AFYGVFDGHG GVDAASFTKK NIMKLVMEDK HFPTSTKKAT
101: RSAFVKTDHA LADASSLDRS SGTTALTALI LDKTMLIANA GDSRAVLGKR GRAIELSKDH KPNCTSERLR IEKLGGVIYD GYLNGQLSVA RALGDWHIKG
201: TKGSLCPLSC EPELEEIVLT EEDEYLIMGC DGLWDVMSSQ CAVTMVRREL MQHNDPERCS QALVKEALQR NSCDNLTVVV VCFSPEAPPR IEIPKSHKRR
301: SISAEGLDLL KGVLNEL

Arabidopsis Description

Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.