Factsheet for TraesCS1B01G216500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G205700.1	Wheat	plastid	98.92	98.92
TraesCS1A01G202300.1	Wheat	plastid	98.38	98.38
HORVU1Hr1G052160.1	Barley	plastid	97.3	90.23
KXG39006	Sorghum	plastid	86.22	85.75
Zm00001d000391_P002	Maize	plastid	84.86	84.41
Zm00001d029772_P001	Maize	plastid	84.59	83.47
KRH62979	Soybean	cytosol	30.0	68.94
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	69.19	66.84
VIT_07s0031g02160.t01	Wine grape	cytosol	65.14	66.76
VIT_18s0122g01010.t01	Wine grape	cytosol	69.19	66.49
GSMUA_Achr4P25900_001	Banana	cytosol	68.65	66.49
GSMUA_Achr11P...	Banana	plastid	66.22	65.86
Bra036796.1-P	Field mustard	nucleus	55.68	65.4
GSMUA_Achr9P23890_001	Banana	plastid	64.05	63.2
CDY16304	Canola	nucleus	60.0	62.54
CDY33277	Canola	nucleus	60.27	62.47
CDY17190	Canola	cytosol	63.24	62.4
Bra038901.1-P	Field mustard	nucleus	60.0	62.18
CDX73719	Canola	nucleus	60.54	62.05
Bra005481.1-P	Field mustard	cytosol	62.97	61.97
AT2G33700.1	Thale cress	cytosol	63.24	61.58
KRH51582	Soybean	cytosol	64.05	61.56
CDX78007	Canola	nucleus	60.0	61.5
AT3G51470.1	Thale cress	nucleus	59.73	61.22
PGSC0003DMT400059610	Potato	cytosol	61.35	61.19
CDY53789	Canola	cytosol	62.7	60.26
CDY27953	Canola	cytosol	62.16	60.21
KRH76528	Soybean	cytosol	60.54	59.89
CDY37699	Canola	cytosol	62.43	59.84
KRH28935	Soybean	nucleus	59.73	59.09
GSMUA_AchrUn_...	Banana	cytosol	71.35	58.8
Bra021870.1-P	Field mustard	endoplasmic reticulum	63.24	58.35
PGSC0003DMT400025874	Potato	cytosol	60.54	58.18
Solyc02g082490.2.1	Tomato	cytosol	60.27	58.07
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	60.27	58.07
Solyc04g082600.2.1	Tomato	cytosol	60.0	57.66
KRH60899	Soybean	cytosol	50.27	56.36
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	49.19	50.28
TraesCS7B01G045100.1	Wheat	cytosol	45.68	47.88
TraesCS6B01G398500.1	Wheat	cytosol	45.14	47.44
TraesCS1B01G095600.1	Wheat	cytosol	47.3	45.57
TraesCS5B01G082500.1	Wheat	cytosol	47.03	45.43
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	25.95	26.67
TraesCS5B01G362300.1	Wheat	cytosol	25.95	25.13
TraesCS6B01G051200.1	Wheat	cytosol	21.35	24.31
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	25.95	24.24
TraesCS2B01G374900.1	Wheat	cytosol	24.32	23.56
TraesCS7B01G411900.1	Wheat	cytosol	24.32	21.9
TraesCS4B01G184100.1	Wheat	mitochondrion	23.24	21.29
TraesCS3B01G378000.1	Wheat	cytosol	26.76	15.14

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF528	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS1B01G216500	EnsemblPlants:TraesCS1B01G216500.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:392434612..392437449

Molecular Weight (calculated)

39807.7 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.135

Length

370 amino acids

Sequence
(BLAST)

001: MSGGVEPETP PSSGGSATGS PMARKPPRHQ LTAIRHCASS ARIAAASTDL GLDSGTLSLI SPPDIRPSFL PVFRSGSCAN IGPKSYMEDE HVCIDSLIEH
101: LGMLTPAIPA PGAFYGVFDG HGGTDAVCFV RKNLLKFIIE DGHFPNSMEK AIRSAFVKAD HAIADSLSLD RNSGTTALTA LIFGRTLLVA NAGDCRAVLG
201: KRGRAVELSK DHKPSCKSEK LRIENLGGIV FDGYLNGQLS VARAIGDWHV KGSKGSISPL TPEPEFQEVR LTEEDEFLII GCDGLWDVMT SQCAVSMVRK
301: ELMAHNDPER CSRELVQEAL RRDTCDNLTA VVVCFSADPP PQIEIPRFRV RRSISMEGLH MLKGALDSNA

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.