Factsheet for PGSC0003DMT400025874

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082600.2.1	Tomato	cytosol	96.62	96.62
KRH62979	Soybean	cytosol	34.29	81.99
VIT_18s0122g01010.t01	Wine grape	cytosol	72.47	72.47
KRH51582	Soybean	cytosol	69.09	69.09
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	67.79	68.15
GSMUA_Achr4P25900_001	Banana	cytosol	65.71	66.23
GSMUA_Achr11P...	Banana	plastid	62.86	65.05
GSMUA_Achr9P23890_001	Banana	plastid	63.12	64.8
KRH60899	Soybean	cytosol	54.55	63.64
PGSC0003DMT400059610	Potato	cytosol	59.48	61.73
TraesCS1A01G202300.1	Wheat	plastid	58.7	61.08
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	60.78	60.94
TraesCS1B01G216500.1	Wheat	plastid	58.18	60.54
TraesCS1D01G205700.1	Wheat	plastid	57.92	60.27
Zm00001d000391_P002	Maize	plastid	56.36	58.33
KXG39006	Sorghum	plastid	56.36	58.33
Zm00001d029772_P001	Maize	plastid	56.1	57.6
GSMUA_AchrUn_...	Banana	cytosol	65.71	56.35
HORVU1Hr1G052160.1	Barley	plastid	58.18	56.14
PGSC0003DMT400013370	Potato	cytosol	44.16	48.3
PGSC0003DMT400018825	Potato	cytosol	43.64	47.73
PGSC0003DMT400067098	Potato	cytosol, plastid	45.19	46.4
PGSC0003DMT400020228	Potato	cytosol	44.42	44.65
PGSC0003DMT400078867	Potato	nucleus	43.12	43.34
PGSC0003DMT400069839	Potato	cytosol	42.6	41.0
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	17.4	32.52
PGSC0003DMT400014727	Potato	peroxisome	20.0	22.78

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006470
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	GO:GO:0061416	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1AM89
PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400009990	PGSC:PGSC0003DMG400009990	EnsemblPlants:PGSC0003DMT400025874	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF528
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295AC68	SEG:seg	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400009990]

Coordinates

chr4:-:71801100..71806296

Molecular Weight (calculated)

42309.2 Da

IEP (calculated)

4.690

GRAVY (calculated)

-0.282

Length

385 amino acids

Sequence
(BLAST)

001: MAAYTDFSPP FAIVEGSYSK ENTSAVKDEL LEGSKELKMS DDKPLRDPSV VRYSVNSTAL VADTDLDFEI TEKGFQHPSE GQSNFEPIFR SGSCAEKGPK
101: QYMEDEHICI DDLVNHVNEI AGSTSPAAFY GVFDGHGGTD AALFVRNNIL KFIMEDPCFP MCLEKALKNA FLKADYAFAD NSSIDISSGT TALTALMFGR
201: NMIVANAGDC RAVLGKRGKA IELSKDHKPN SASERHRIEK LGGVIYDGYL NGQLSIARAL GDWHMKGPKG SAYPLSAEPE LQETLLTEDD EFLIMGCDGL
301: WDVMSSQCAV TMARKELMLH NDPERCSREL VREALKRNTC DNLTVIVICF SPDPPPRIEI PPTRICRSIS VEGLNLLKSV LESNS

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.