Factsheet for PGSC0003DMT400013370

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g068000.2.1	Tomato	cytosol	98.86	98.86
PGSC0003DMT400018825	Potato	cytosol	81.82	81.82
KRH31749	Soybean	cytosol	76.14	67.68
KRH69165	Soybean	cytosol	76.14	67.68
VIT_07s0005g02110.t01	Wine grape	cytosol	75.0	67.01
GSMUA_AchrUn_...	Banana	cytosol	55.4	66.1
GSMUA_Achr10P...	Banana	cytosol	67.61	59.5
GSMUA_Achr3P08410_001	Banana	cytosol	68.18	58.82
GSMUA_Achr8P22250_001	Banana	cytosol	61.08	58.27
TraesCS5B01G082500.1	Wheat	cytosol	63.35	58.22
TraesCS5D01G089900.1	Wheat	cytosol	63.07	58.12
Os05t0134200-01	Rice	cytosol	64.2	58.1
Os01t0295700-01	Rice	cytosol	62.22	57.63
HORVU1Hr1G016640.2	Barley	cytosol	62.22	57.33
TraesCS1D01G079600.1	Wheat	cytosol	62.22	57.33
TraesCS5A01G076600.1	Wheat	cytosol	62.5	57.29
TraesCS1A01G077500.1	Wheat	cytosol	62.22	57.03
TraesCS1B01G095600.1	Wheat	cytosol	61.93	56.77
HORVU5Hr1G020300.3	Barley	plastid	61.93	56.33
Zm00001d008171_P001	Maize	cytosol	62.78	55.81
EES02832	Sorghum	cytosol	63.35	55.61
EES17660	Sorghum	cytosol, peroxisome, plastid	62.78	55.11
Zm00001d024732_P001	Maize	cytosol	61.36	53.33
PGSC0003DMT400069839	Potato	cytosol	57.1	50.25
PGSC0003DMT400059610	Potato	cytosol	46.59	44.2
PGSC0003DMT400025874	Potato	cytosol	48.3	44.16
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	44.6	40.89
PGSC0003DMT400020228	Potato	cytosol	43.75	40.21
PGSC0003DMT400067098	Potato	cytosol, plastid	41.76	39.2
PGSC0003DMT400078867	Potato	nucleus	42.61	39.16
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	19.32	33.01
PGSC0003DMT400014727	Potato	peroxisome	23.01	23.96

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102590525	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1A2R1	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400005213
PGSC:PGSC0003DMG400005213	EnsemblPlants:PGSC0003DMT400013370	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000295A1CD	RefSeq:XP_006349159.1	SEG:seg	:	:

Description

Protein phosphatase-2C [Source:PGSC_GENE;Acc:PGSC0003DMG400005213]

Coordinates

chr1:+:63178774..63183944

Molecular Weight (calculated)

38839.1 Da

IEP (calculated)

4.625

GRAVY (calculated)

-0.150

Length

352 amino acids

Sequence
(BLAST)

001: MGAEAEVMVQ LQHTIPVLDV PCCSDLDVKS PESTILQFIP SIRSGSFADT GPRRFMEDEH IRIDDLSAHL GSLMKFPKPS AFYGIFDGHG GPEAAAHVRK
101: NVLGLLFSDT NFPETSEVDD AFLEGVESSL RKGFLLADLA LADDCNVSNS SGTTALTALV LGRLLMVANA GDCRAVLCRN GEAIDMSQDH RPNYPSERRR
201: VEELGGFIDD GYLNGILSVT RALGDWDMKL PRGSASPLIA EPEFRQIVLT EEDEFLIIAC DGIWDVLSSQ QAVSLVRRGL RRHDDPEQCA KDLVMEALRL
301: NTFDNLTVIV VCFTSPDHQE LSPMRHRRLR SCSFSAEALY SLQSWLDNKG SH

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.