Factsheet for PGSC0003DMT400069839

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	97.5	94.89
PGSC0003DMT400018825	Potato	cytosol	50.75	57.67
GSMUA_AchrUn_...	Banana	cytosol	42.25	57.29
PGSC0003DMT400013370	Potato	cytosol	50.25	57.1
KRH02420	Soybean	cytosol	52.25	55.0
KRH50630	Soybean	cytosol	53.0	54.92
VIT_05s0020g00390.t01	Wine grape	plastid	52.5	53.85
KRH36917	Soybean	cytosol	54.25	53.58
AT1G48040.1	Thale cress	cytosol	49.5	51.7
GSMUA_Achr10P...	Banana	cytosol	51.25	51.25
Zm00001d008171_P001	Maize	cytosol	50.0	50.51
GSMUA_Achr8P22250_001	Banana	cytosol	46.5	50.41
CDY20937	Canola	cytosol	47.0	50.4
Bra018701.1-P	Field mustard	cytosol	47.25	50.4
CDX93640	Canola	cytosol	47.25	50.4
Os05t0134200-01	Rice	cytosol	49.0	50.39
Os01t0295700-01	Rice	cytosol	47.5	50.0
HORVU1Hr1G016640.2	Barley	cytosol	47.5	49.74
TraesCS1D01G079600.1	Wheat	cytosol	47.5	49.74
GSMUA_Achr3P08410_001	Banana	cytosol	50.25	49.26
TraesCS1A01G077500.1	Wheat	cytosol	47.25	49.22
TraesCS5D01G089900.1	Wheat	cytosol	47.0	49.21
TraesCS5B01G082500.1	Wheat	cytosol	47.0	49.09
TraesCS5A01G076600.1	Wheat	cytosol	47.0	48.96
TraesCS1B01G095600.1	Wheat	cytosol	47.0	48.96
EES17660	Sorghum	cytosol, peroxisome, plastid	49.0	48.88
EES02832	Sorghum	cytosol	49.0	48.88
HORVU5Hr1G020300.3	Barley	plastid	46.5	48.06
Zm00001d024732_P001	Maize	cytosol	48.25	47.65
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	48.75	46.21
CDX95863	Canola	golgi, mitochondrion	44.75	42.72
PGSC0003DMT400025874	Potato	cytosol	41.0	42.6
PGSC0003DMT400059610	Potato	cytosol	38.5	41.51
CDX92122	Canola	mitochondrion	32.75	38.76
PGSC0003DMT400020228	Potato	cytosol	36.0	37.6
PGSC0003DMT400067098	Potato	cytosol, plastid	34.75	37.07
PGSC0003DMT400078867	Potato	nucleus	35.25	36.81
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	35.25	36.72
Bra022205.1-P	Field mustard	mitochondrion	23.75	35.98
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	15.75	30.58
PGSC0003DMT400014727	Potato	peroxisome	19.75	23.37

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:M1CL85	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400027155	PGSC:PGSC0003DMG400027155
EnsemblPlants:PGSC0003DMT400069839	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF316	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000296A73F	:	:	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400027155]

Coordinates

chr5:+:48571907..48574408

Molecular Weight (calculated)

43697.3 Da

IEP (calculated)

4.546

GRAVY (calculated)

-0.173

Length

400 amino acids

Sequence
(BLAST)

001: MVVVDAEILC QPNVSVEYIG VSTAAPVIGD EDLDFFDVSA TATSSSRPKS REFRSADLVS VDISRSDSGV RCSTNTQTTI IDSARSSNVI PAIRSGSYTD
101: IGPRRSNEDE HIRVDDLSAQ LGSLYNWPLP GAFYAVFDGH GGSDAAAYVR TNAIRFFFED ANLPQTSAVD QAFLEELESS HFRAFLIADQ ALADECSVDA
201: YCGTTAITAL VLGRHLVVAN AGDCRAVLCR KGVAVQLSQD HRPTCLAERQ RVEKLGGIIE YGCLNGDLAI TRALGDWYMK LPFGSASPLT AEPEVKQMLL
301: TEDDEFMILG CDGIWDVMSN QDAVNVVRRE LRLHNDPQQS ARELVNQALC KDTDDNLTAI VVCFTSPDHR TSVPSQRPRF RCCNLSEDAR KKLQSLLGSN

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.