Factsheet for VIT_05s0020g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02420	Soybean	cytosol	61.28	62.89
GSMUA_AchrUn_...	Banana	cytosol	47.44	62.71
KRH50630	Soybean	cytosol	61.28	61.92
KRH36917	Soybean	cytosol	63.08	60.74
VIT_07s0005g02110.t01	Wine grape	cytosol	60.26	59.64
HORVU1Hr1G016640.2	Barley	cytosol	55.13	56.28
TraesCS1B01G095600.1	Wheat	cytosol	55.38	56.25
GSMUA_Achr8P22250_001	Banana	cytosol	53.08	56.1
TraesCS1D01G079600.1	Wheat	cytosol	54.87	56.02
TraesCS1A01G077500.1	Wheat	cytosol	55.13	55.99
CDY20937	Canola	cytosol	53.33	55.76
CDX93640	Canola	cytosol	53.08	55.2
Os01t0295700-01	Rice	cytosol	53.59	55.0
Bra018701.1-P	Field mustard	cytosol	52.82	54.93
TraesCS5D01G089900.1	Wheat	cytosol	53.59	54.71
Os05t0134200-01	Rice	cytosol	54.36	54.5
TraesCS5B01G082500.1	Wheat	cytosol	53.33	54.31
AT1G48040.1	Thale cress	cytosol	53.33	54.31
TraesCS5A01G076600.1	Wheat	cytosol	53.33	54.17
GSMUA_Achr10P...	Banana	cytosol	55.38	54.0
GSMUA_Achr3P08410_001	Banana	cytosol	56.15	53.68
HORVU5Hr1G020300.3	Barley	plastid	52.82	53.23
EES17660	Sorghum	cytosol, peroxisome, plastid	54.1	52.62
PGSC0003DMT400069839	Potato	cytosol	53.85	52.5
EES02832	Sorghum	cytosol	53.59	52.12
Zm00001d008171_P001	Maize	cytosol	52.82	52.02
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.59	50.85
Zm00001d024732_P001	Maize	cytosol	52.31	50.37
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	49.23	45.5
CDX95863	Canola	golgi, mitochondrion	46.15	42.96
VIT_11s0118g00700.t01	Wine grape	cytosol	38.72	42.42
VIT_07s0031g02160.t01	Wine grape	cytosol	38.97	42.11
CDX92122	Canola	mitochondrion	35.13	40.53
VIT_04s0008g04780.t01	Wine grape	cytosol	39.49	40.53
VIT_18s0122g01010.t01	Wine grape	cytosol	39.74	40.26
Bra022205.1-P	Field mustard	mitochondrion	22.05	32.58
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	23.59	24.34
VIT_09s0018g01140.t01	Wine grape	nucleus	22.05	24.02
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	21.79	21.63
VIT_08s0040g00760.t01	Wine grape	cytosol	25.64	15.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	ProteinID:CCB50270	ProteinID:CCB50270.1
UniProt:F6HE12	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006470	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0016787	GO:GO:0019538	GO:GO:0030246	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF316	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00021081BD	ArrayExpress:VIT_05s0020g00390	EnsemblPlantsGene:VIT_05s0020g00390	EnsemblPlants:VIT_05s0020g00390.t01
unigene:Vvi.18958	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:2201436..2205526

Molecular Weight (calculated)

43118.7 Da

IEP (calculated)

4.749

GRAVY (calculated)

-0.006

Length

390 amino acids

Sequence
(BLAST)

001: MLDLPPSSPS PSSPILQAVR ASQEPVAAEF AATRFESMEP FSVLIAPTFS HFFTGIILIM VVDCSDIIQE AVIESSTIKF VPSIRSGSYA DIGLRKSMED
101: EHIRIDDLSA EVGPLFRCSL PSAFYAVFDG HGGPEAAAYI KRNVMRLFFE DVDIPQMSEI NDIFLEELEN CHRKAFLLAD LALADECTVS SSCGTTALTA
201: LILGRHLLVA NVGDCRAVLC RKGQAVQMSQ DHRPSYLPEC KRVEAVGGYI LDGYLNDLSV TRALGDWGMK FPDGSPSPLI AEPDFRQIIL TEDDEFLIIG
301: CDGIWDAMPN QHAVSLVRRG MRRHNNPQQC ARDLVMEALR LHTPDNLTAI VICFSSPDHS EAFPPPQRLR FRCCSLSEEA RNRLKSLLEG

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.