CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02420	Soybean	cytosol	79.26	84.47
KRH50630	Soybean	cytosol	79.26	83.16
GSMUA_AchrUn_...	Banana	cytosol	47.41	65.08
VIT_05s0020g00390.t01	Wine grape	plastid	60.74	63.08
AT1G48040.1	Thale cress	cytosol	56.05	59.27
KRH31749	Soybean	cytosol	57.53	58.84
KRH69165	Soybean	cytosol	57.04	58.33
CDY20937	Canola	cytosol	53.58	58.18
CDX93640	Canola	cytosol	52.59	56.8
Bra018701.1-P	Field mustard	cytosol	52.59	56.8
GSMUA_Achr8P22250_001	Banana	cytosol	51.36	56.37
TraesCS1D01G079600.1	Wheat	cytosol	53.09	56.28
HORVU1Hr1G016640.2	Barley	cytosol	53.09	56.28
GSMUA_Achr10P...	Banana	cytosol	55.56	56.25
Os01t0295700-01	Rice	cytosol	52.59	56.05
Os05t0134200-01	Rice	cytosol	53.83	56.04
TraesCS1B01G095600.1	Wheat	cytosol	53.09	55.99
TraesCS1A01G077500.1	Wheat	cytosol	53.09	55.99
GSMUA_Achr3P08410_001	Banana	cytosol	56.3	55.88
TraesCS5D01G089900.1	Wheat	cytosol	51.85	54.97
TraesCS5B01G082500.1	Wheat	cytosol	51.85	54.83
Zm00001d008171_P001	Maize	cytosol	53.33	54.55
TraesCS5A01G076600.1	Wheat	cytosol	51.6	54.43
PGSC0003DMT400069839	Potato	cytosol	53.58	54.25
EES17660	Sorghum	cytosol, peroxisome, plastid	53.58	54.11
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	54.32	53.53
KRH62979	Soybean	cytosol	21.23	53.42
EES02832	Sorghum	cytosol	52.84	53.37
Zm00001d024732_P001	Maize	cytosol	52.84	52.84
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	54.07	51.9
HORVU5Hr1G020300.3	Barley	plastid	49.38	51.68
CDX95863	Canola	golgi, mitochondrion	48.89	47.26
KRH51582	Soybean	cytosol	42.96	45.19
CDX92122	Canola	mitochondrion	37.04	44.38
KRH20243	Soybean	cytosol	41.48	43.86
KRH03568	Soybean	cytosol	40.99	43.34
KRH76528	Soybean	cytosol	39.26	42.51
KRH28935	Soybean	nucleus	39.26	42.51
Bra022205.1-P	Field mustard	mitochondrion	27.65	42.42
KRH60899	Soybean	cytosol	34.32	42.12
KRH37886	Soybean	cytosol	39.51	41.99
KRH12874	Soybean	cytosol	38.77	41.42
KRH61828	Soybean	cytosol	37.04	40.54
KRH52505	Soybean	cytosol	36.79	40.27
KRH52312	Soybean	cytosol	23.95	28.12
KRH39122	Soybean	cytosol	21.98	27.38
KRH15637	Soybean	cytosol	22.47	26.84
KRH44580	Soybean	endoplasmic reticulum	23.7	26.09
KRH47317	Soybean	cytosol	23.7	26.09
KRH61653	Soybean	cytosol	8.64	25.74
KRH05380	Soybean	golgi	22.47	25.56
KRH61652	Soybean	cytosol	10.86	22.8
KRH48594	Soybean	cytosol, peroxisome, plastid	13.09	21.81
KRH71677	Soybean	cytosol	25.43	15.63

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	EMBL:ACUP02005400	EnsemblPlantsGene:GLYMA_09G031700
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	UniProt:I1L0M5	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KRH36917
ProteinID:KRH36917	ProteinID:KRH36917.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF316	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00023382C8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:2609548..2612094

Molecular Weight (calculated)

44587.1 Da

IEP (calculated)

4.798

GRAVY (calculated)

-0.104

Length

405 amino acids

Sequence
(BLAST)

001: MIVSQNMVTE AEIICKQNIP MLDVKKYHLR VAQELGVNVK VVEVSPTSNG VPVFGHVRVS SESVSTETTR FESVMGCSEM IEESIIETPA TEFTPNVRSG
101: CCADIGPRGS MDDEHIQIDD LAAHLGFVFK HPMPSAFYAV FDGHGGPDAA AFVKNNAMRL LFEDADMLQS YDADALFLKK LEDSHRRAFL GADLALADEQ
201: SVSSSCGTTA LTALVLGRHL MVANAGDCRA VLCRRGVAVD MSQDHRPSYL PERRRVEELG GFIDDGYLNG YLSVTRALGD WDLKFPLGSA SPLIAEPDVQ
301: VVTLTEDDEF LIIGCDGIWD VISSQDAVSF VRRGLRRHDD PQQCARELVK EALRLHTSDN LTVIVICLSP VQSIVESCPP QRRRFRACSL SEEARNRLRS
401: LLEGN

Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)

001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE

Arabidopsis Description

Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.