CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20243	Soybean	cytosol	95.3	95.3
VIT_11s0118g00700.t01	Wine grape	cytosol	71.28	76.69
KRH12874	Soybean	cytosol	75.2	75.99
KRH37886	Soybean	cytosol	73.37	73.75
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	60.31	73.1
PGSC0003DMT400020228	Potato	cytosol	70.76	70.76
PGSC0003DMT400078867	Potato	nucleus	69.97	69.97
Solyc07g007220.2.1	Tomato	nucleus	69.71	69.71
GSMUA_Achr3P13350_001	Banana	cytosol	51.96	67.69
GSMUA_Achr7P20900_001	Banana	nucleus	62.92	67.32
TraesCS6A01G363900.1	Wheat	cytosol	61.36	66.76
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	59.01	66.47
Os02t0799000-01	Rice	cytosol, plastid	61.36	66.38
TraesCS6B01G398500.1	Wheat	cytosol	60.57	65.91
Zm00001d052018_P001	Maize	cytosol	46.74	65.81
TraesCS7A01G143200.2	Wheat	cytosol	60.57	65.72
TraesCS7D01G144400.3	Wheat	cytosol	60.05	65.16
Os06t0179700-01	Rice	cytosol, plastid	61.1	65.0
EES05962	Sorghum	cytosol	60.05	64.79
EER89322	Sorghum	cytosol	59.79	64.69
TraesCS7B01G045100.1	Wheat	cytosol	59.53	64.59
Zm00001d045128_P001	Maize	cytosol	58.49	63.28
HORVU7Hr1G029330.7	Barley	plastid	58.22	62.99
HORVU6Hr1G086560.2	Barley	mitochondrion	61.36	60.41
KRH62979	Soybean	cytosol	23.24	55.28
KRH52505	Soybean	cytosol	47.52	49.19
KRH61828	Soybean	cytosol	47.52	49.19
KRH76528	Soybean	cytosol	43.34	44.38
KRH28935	Soybean	nucleus	43.08	44.12
KRH51582	Soybean	cytosol	43.86	43.64
KRH02420	Soybean	cytosol	42.04	42.37
KRH31749	Soybean	cytosol	43.6	42.17
KRH69165	Soybean	cytosol	42.82	41.41
KRH50630	Soybean	cytosol	41.51	41.19
KRH36917	Soybean	cytosol	43.34	40.99
KRH60899	Soybean	cytosol	34.2	39.7
KRH15637	Soybean	cytosol	23.76	26.84
KRH52312	Soybean	cytosol	23.76	26.38
KRH47317	Soybean	cytosol	25.33	26.36
KRH39122	Soybean	cytosol	21.93	25.85
KRH44580	Soybean	endoplasmic reticulum	24.8	25.82
KRH05380	Soybean	golgi	23.76	25.56
KRH61652	Soybean	cytosol	12.53	24.87
KRH48594	Soybean	cytosol, peroxisome, plastid	14.62	23.05
KRH61653	Soybean	cytosol	7.05	19.85
KRH71677	Soybean	cytosol	25.07	14.57

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100820303	MapMan:15.5.38	Gene3D:3.60.40.10	EMBL:ACUP02010352
EnsemblPlantsGene:GLYMA_17G105800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K7ML00
EnsemblPlants:KRH03568	ProteinID:KRH03568	ProteinID:KRH03568.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF299
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0001CAA6B7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:8293297..8296129

Molecular Weight (calculated)

42293.2 Da

IEP (calculated)

4.891

GRAVY (calculated)

-0.344

Length

383 amino acids

Sequence
(BLAST)

001: MCVQDGEQAG EDHIEKNVDN SIRVSWPLHC DLLNAHMDNK EKDSSFRTPS DQISVANSSP LESICEDAEI VDKKQNLMNF VPTLRSGEWS DIGDRTSMED
101: THICIGDLAE KFGNNELYKE AISFYGVFDG HGGKSAAQFV RDHLPRVIVE DADFPLELEK VVTRSFLEID AEFARSCSTE SSLSSGTTAL TAIILGRSLL
201: VANAGDCRAV LSRGGGAIEM SKDHRPLCIK ERKRIESLGG YIDDGYLNGQ LGVTRALGNW HLQGMKEING KGGPLSAEPE LKLITLTKED EFLIIGSDGI
301: WDVFRSQNAV DFARRRLQEH NDVKQCCKEV IGEAIKRGAT DNLTVVMICF HSEPPAPMVV ERPRVRRSIS AEGLQNLKCL LEG

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.