Factsheet for TraesCS6A01G363900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G398500.1	Wheat	cytosol	97.44	97.44
HORVU6Hr1G086560.2	Barley	mitochondrion	95.74	86.63
Os02t0799000-01	Rice	cytosol, plastid	86.08	85.59
EES05962	Sorghum	cytosol	83.24	82.54
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	76.42	79.12
Zm00001d052018_P001	Maize	cytosol	60.51	78.31
TraesCS7A01G143200.2	Wheat	cytosol	74.43	74.22
GSMUA_Achr7P20900_001	Banana	nucleus	69.03	67.88
VIT_11s0118g00700.t01	Wine grape	cytosol	68.47	67.7
GSMUA_Achr3P13350_001	Banana	cytosol	55.4	66.33
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	56.25	62.66
KRH20243	Soybean	cytosol	67.05	61.62
KRH12874	Soybean	cytosol	66.19	61.48
KRH03568	Soybean	cytosol	66.76	61.36
PGSC0003DMT400020228	Potato	cytosol	65.91	60.57
KRH37886	Soybean	cytosol	65.06	60.1
PGSC0003DMT400078867	Potato	nucleus	65.06	59.79
Solyc07g007220.2.1	Tomato	nucleus	64.49	59.27
TraesCS7A01G371100.1	Wheat	plastid	53.12	51.94
TraesCS1A01G202300.1	Wheat	plastid	47.73	45.41
TraesCS1A01G077500.1	Wheat	cytosol	44.03	40.36
TraesCS5A01G076600.1	Wheat	cytosol	43.18	39.58
TraesCS5A01G359900.1	Wheat	cytosol	28.41	26.32
TraesCS6A01G037000.1	Wheat	cytosol	22.73	25.0
TraesCS4A01G120800.1	Wheat	cytosol	26.7	24.8
TraesCS7A01G532000.1	Wheat	mitochondrion	17.9	24.51
TraesCS7A01G504800.1	Wheat	cytosol	26.42	23.37
TraesCS5A01G181600.1	Wheat	nucleus	23.58	23.06
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	24.72	21.97
TraesCS2A01G354400.1	Wheat	cytosol	23.01	21.2
TraesCS3A01G200800.1	Wheat	cytosol	26.14	14.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF299	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6A01G363900
EnsemblPlants:TraesCS6A01G363900.1	TIGR:cd00143	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:592684678..592688035

Molecular Weight (calculated)

39144.2 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.331

Length

352 amino acids

Sequence
(BLAST)

001: MCVEGFEDAQ IERPADFAME RVCENTVSID FKQAKMVAGI EESWHNFVPA IRSGDWSDIG GRDYMEDAHV CIPNLAKNFG YNMVDDEVIS FYGVFDGHGG
101: KDAAQYVRDN LPRVIVEDAA FPLELEKAVR RSFVQTDSQF AEKCSLQDGL SSGTTALTAM IFGRSLLVAN AGDCRAVLSR RGAAIEMSKD HRTCCLNERK
201: RVESLGGYVD DGYLNGQLAV TRALGDWHLD GLKEIGEPGG PLSAEPELKM ITLTKDDEFL IIGSDGIWDY FSNQNSVDFA RRRLQEHNDL RRCCKEIVEE
301: AIRRGATDNL TAVMVSFHQE APPQIRVNRA GRVERSISAE GLHSLRVLLE GQ

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.