Factsheet for VIT_11s0118g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20243	Soybean	cytosol	77.53	72.06
KRH03568	Soybean	cytosol	76.69	71.28
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	61.8	69.62
KRH12874	Soybean	cytosol	73.31	68.87
Os02t0799000-01	Rice	cytosol, plastid	68.26	68.64
TraesCS6A01G363900.1	Wheat	cytosol	67.7	68.47
GSMUA_Achr7P20900_001	Banana	nucleus	68.82	68.44
GSMUA_Achr3P13350_001	Banana	cytosol	56.18	68.03
PGSC0003DMT400020228	Potato	cytosol	73.03	67.89
PGSC0003DMT400078867	Potato	nucleus	72.47	67.36
TraesCS6B01G398500.1	Wheat	cytosol	66.57	67.33
Solyc07g007220.2.1	Tomato	nucleus	72.19	67.1
KRH37886	Soybean	cytosol	71.63	66.93
EER89322	Sorghum	cytosol	66.01	66.38
Zm00001d045128_P001	Maize	cytosol	65.17	65.54
Zm00001d052018_P001	Maize	cytosol	50.0	65.44
EES05962	Sorghum	cytosol	65.17	65.35
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	62.36	65.29
Os06t0179700-01	Rice	cytosol, plastid	65.73	65.0
TraesCS7A01G143200.2	Wheat	cytosol	63.76	64.31
TraesCS7D01G144400.3	Wheat	cytosol	63.2	63.74
TraesCS7B01G045100.1	Wheat	cytosol	62.92	63.46
HORVU7Hr1G029330.7	Barley	plastid	62.36	62.71
HORVU6Hr1G086560.2	Barley	mitochondrion	66.57	60.93
VIT_04s0008g04780.t01	Wine grape	cytosol	53.09	49.74
VIT_07s0031g02160.t01	Wine grape	cytosol	48.03	47.37
VIT_18s0122g01010.t01	Wine grape	cytosol	46.91	43.38
VIT_07s0005g02110.t01	Wine grape	cytosol	44.94	40.61
VIT_05s0020g00390.t01	Wine grape	plastid	42.42	38.72
VIT_09s0018g01140.t01	Wine grape	nucleus	25.28	25.14
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	25.56	23.16
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	23.31	21.96
VIT_08s0040g00760.t01	Wine grape	cytosol	27.25	14.72

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100243121	wikigene:100243121	MapMan:15.5.38	Gene3D:3.60.40.10
ProteinID:CBI25587	ProteinID:CBI25587.3	UniProt:D7T505	EMBL:FN595515	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100243121	wikigene:LOC100243121	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF299	SMART:SM00332	SUPFAM:SSF81606	TIGR:TC61181	UniParc:UPI0001985948	ArrayExpress:VIT_11s0118g00700
EnsemblPlantsGene:VIT_11s0118g00700	EnsemblPlants:VIT_11s0118g00700.t01	unigene:Vvi.14594	RefSeq:XP_002267448	RefSeq:XP_002267448.1	SEG:seg

Description

No Description!

Coordinates

chr11:+:6467916..6472998

Molecular Weight (calculated)

39298.6 Da

IEP (calculated)

4.926

GRAVY (calculated)

-0.244

Length

356 amino acids

Sequence
(BLAST)

001: MCVKDSEQVS EEMENSSLSD HDATKLGNSF PLQSISEDKV ASDKEQNLVS IFVPALRSGE WSDIGGRPYM EDTHICISDL AKKFNHNLLD KEAISFYGVF
101: DGHGGNAAAQ FVRDHLPRVI VEDADFPLAL EKVVMRSFIE TDAEFAKTCS LESSLSSGTT ALTAMIFGRS LLVANAGDCR AVLSQLGVAI EMSKDHRPCC
201: TRERSRIESL GGYIDDGYLN GQISVTRALG DWHLEGLKDI GERGGPLSAE PELKLMTLTK EHEFLIIGSD GIWEVFRSQN AVDFVRRRLQ EHNDVKLCCK
301: EVVEEAIKRG ATDNLTVVVV SFHSEPPPLK EVVRRARVTR SISAEGLQNL RSLLEG

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.