Factsheet for Os06t0179700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89322	Sorghum	cytosol	81.39	82.77
Zm00001d045128_P001	Maize	cytosol	80.56	81.92
TraesCS7A01G143200.2	Wheat	cytosol	79.44	81.02
TraesCS7D01G144400.3	Wheat	cytosol	79.17	80.74
TraesCS7B01G045100.1	Wheat	cytosol	78.89	80.45
HORVU7Hr1G029330.7	Barley	plastid	76.67	77.97
Os02t0799000-01	Rice	cytosol, plastid	76.11	77.4
GSMUA_Achr7P20900_001	Banana	nucleus	67.5	67.88
VIT_11s0118g00700.t01	Wine grape	cytosol	65.0	65.73
GSMUA_Achr3P13350_001	Banana	cytosol	53.06	64.97
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	54.44	62.03
KRH20243	Soybean	cytosol	65.83	61.88
KRH12874	Soybean	cytosol	65.0	61.74
KRH03568	Soybean	cytosol	65.0	61.1
KRH37886	Soybean	cytosol	64.17	60.63
PGSC0003DMT400020228	Potato	cytosol	64.17	60.31
PGSC0003DMT400078867	Potato	nucleus	63.89	60.05
Solyc07g007220.2.1	Tomato	nucleus	63.61	59.79
Os06t0597200-01	Rice	cytosol	49.44	48.5
Os05t0134200-01	Rice	cytosol	44.44	41.13
Os01t0295700-01	Rice	cytosol	42.5	40.26
Os09t0558000-01	Rice	plasma membrane	26.67	27.27
Os04t0500900-00	Rice	plasma membrane	20.0	24.91
Os02t0180000-01	Rice	cytosol, plasma membrane	25.0	24.86
Os02t0606900-01	Rice	cytosol	23.06	24.41
Os06t0651600-01	Rice	cytosol	24.17	23.64
Os09t0314400-01	Rice	mitochondrion	23.33	20.1
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	24.44	18.8
Os02t0598500-00	Rice	cytosol	24.17	16.7
Os02t0599150-01	Rice	cytosol	24.17	16.7
Os02t0607500-00	Rice	vacuole	24.17	14.97
Os01t0541900-01	Rice	cytosol	25.83	14.16
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	8.06	13.06
Os02t0599151-00	Rice	vacuole	23.89	11.7
Os02t0599200-01	Rice	cytosol, peroxisome	9.44	7.38
Os02t0600100-01	Rice	plasma membrane	0.28	0.26

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	EntrezGene:4340303	EMBL:AK065602
ProteinID:BAD72302.1	ProteinID:BAD72550.1	ProteinID:BAF18885.1	ProteinID:BAS96452.1	ProteinID:EEE65204.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlantsGene:Os06g0179700	EnsemblPlants:Os06t0179700-01	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF531	UniProt:Q5SMK6	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000046D47F	RefSeq:XP_015643386.1	SEG:seg	:	:	:

Description

protein phosphatase 2C54, protein phosphatase 2C 54, protein phosphatase 84Similar to DNA-binding protein phosphatase 2C. (Os06t0179700-01)

Coordinates

chr6:-:3947927..3952217

Molecular Weight (calculated)

39353.4 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.342

Length

360 amino acids

Sequence
(BLAST)

001: MCVEESEGAE RLDFGEPAAA AADAGKSKSK SPDELPSPRM ERVCENTTAA DFKQNKSGNF VPNIRSGDWS DIGGRQYMED THVCITDLAK NFGYQSVDNE
101: AISFYGVFDG HGGKDAAHFV RDNLPRIIVE DADFPLELEK VVRRSFVHAD NQFAKTTLSS GTTALTAMIF GRTLLIANAG DCRAVLSRCG TAIEMSVDHR
201: PCSLSEKLRV ESLGGYVDDG YLNGLLGVTR ALGDWHLEGM KEAGNPGGPL SAEPELKMIT LTKDDEFLII GSDGIWDVFS NQNVVDFARR RLQEHNDVKS
301: CCREIVEEAI KRGATDNLTA VLVSFHLEAP PQVRVSRPGR VARSISAEGL NSLRTLLRNQ

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.