CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37886	Soybean	cytosol	92.08	91.6
KRH20243	Soybean	cytosol	77.31	76.5
KRH03568	Soybean	cytosol	75.99	75.2
VIT_11s0118g00700.t01	Wine grape	cytosol	68.87	73.31
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	58.05	69.62
GSMUA_Achr3P13350_001	Banana	cytosol	52.77	68.03
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	59.89	66.76
PGSC0003DMT400078867	Potato	nucleus	67.28	66.58
EES05962	Sorghum	cytosol	62.27	66.48
PGSC0003DMT400020228	Potato	cytosol	67.02	66.32
TraesCS6A01G363900.1	Wheat	cytosol	61.48	66.19
Zm00001d052018_P001	Maize	cytosol	47.23	65.81
Solyc07g007220.2.1	Tomato	nucleus	66.23	65.54
TraesCS7A01G143200.2	Wheat	cytosol	60.95	65.44
TraesCS6B01G398500.1	Wheat	cytosol	60.69	65.34
GSMUA_Achr7P20900_001	Banana	nucleus	61.48	65.08
Os06t0179700-01	Rice	cytosol, plastid	61.74	65.0
EER89322	Sorghum	cytosol	60.69	64.97
Os02t0799000-01	Rice	cytosol, plastid	60.69	64.97
TraesCS7D01G144400.3	Wheat	cytosol	60.42	64.87
TraesCS7B01G045100.1	Wheat	cytosol	59.89	64.31
Zm00001d045128_P001	Maize	cytosol	59.1	63.28
HORVU7Hr1G029330.7	Barley	plastid	59.1	63.28
HORVU6Hr1G086560.2	Barley	mitochondrion	61.21	59.64
KRH62979	Soybean	cytosol	23.75	55.9
KRH61828	Soybean	cytosol	46.44	47.57
KRH52505	Soybean	cytosol	46.17	47.3
KRH76528	Soybean	cytosol	44.59	45.19
KRH28935	Soybean	nucleus	44.06	44.65
KRH51582	Soybean	cytosol	44.85	44.16
KRH02420	Soybean	cytosol	40.63	40.53
KRH69165	Soybean	cytosol	42.22	40.4
KRH31749	Soybean	cytosol	42.22	40.4
KRH60899	Soybean	cytosol	34.83	40.0
KRH50630	Soybean	cytosol	40.11	39.38
KRH36917	Soybean	cytosol	41.42	38.77
KRH15637	Soybean	cytosol	24.8	27.73
KRH52312	Soybean	cytosol	24.8	27.25
KRH05380	Soybean	golgi	25.07	26.69
KRH47317	Soybean	cytosol	25.86	26.63
KRH44580	Soybean	endoplasmic reticulum	25.59	26.36
KRH61652	Soybean	cytosol	12.4	24.35
KRH39122	Soybean	cytosol	20.32	23.69
KRH61653	Soybean	cytosol	8.18	22.79
KRH48594	Soybean	cytosol, peroxisome, plastid	13.98	21.81
KRH71677	Soybean	cytosol	26.65	15.33

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100813157	MapMan:15.5.38	Gene3D:3.60.40.10	EMBL:ACUP02009420
ncoils:Coil	EnsemblPlantsGene:GLYMA_15G201300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1MHZ3	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH12874	ProteinID:KRH12874	ProteinID:KRH12874.1	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF521	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00023D1E0E	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:24734338..24738231

Molecular Weight (calculated)

42330.4 Da

IEP (calculated)

5.461

GRAVY (calculated)

-0.353

Length

379 amino acids

Sequence
(BLAST)

001: MCVKDQEKDM MDSTTTNSWP LQHCHLLLKT HMDKKGSFLR TSSDDTTNIS VQNSFPLESI CEDTVVVDKK QNLMNFVPAL RSGEWSDIGE RPYMEDTHIC
101: IGDLVKKFNY DVLSGEAVSF YGVFDGHGGK SAAQFVRDNL PRVIVEDVNF PLELEKVVKR SFVETDAAFL KTSSHEPSLS SGTTAITAII FGRSLLVANA
201: GDCRAVLSHH GRAIEMSKDH RPNCINERTR VESLGGFIDD GYLNGQLGVT RALGDWHIEG MKEMSERGGP LSAEPELKLM TLTKEDEFLI IASDGIWDVF
301: SSQNAVDFAR RRLQEHNDEK QCCKEIVQEA SKRGSTDNLT VVMVCFNLDP PPPVVVERTR VRRSISAEGL QNLKCLLKQ

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.