CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50630	Soybean	cytosol	96.05	94.56
KRH36917	Soybean	cytosol	84.47	79.26
GSMUA_AchrUn_...	Banana	cytosol	50.53	65.08
VIT_05s0020g00390.t01	Wine grape	plastid	62.89	61.28
KRH31749	Soybean	cytosol	60.26	57.83
GSMUA_Achr8P22250_001	Banana	cytosol	55.79	57.45
KRH69165	Soybean	cytosol	59.47	57.07
Os01t0295700-01	Rice	cytosol	56.32	56.32
AT1G48040.1	Thale cress	cytosol	56.58	56.14
Os05t0134200-01	Rice	cytosol	57.37	56.04
HORVU1Hr1G016640.2	Barley	cytosol	56.32	56.02
TraesCS1D01G079600.1	Wheat	cytosol	56.32	56.02
TraesCS1A01G077500.1	Wheat	cytosol	56.32	55.73
TraesCS1B01G095600.1	Wheat	cytosol	56.32	55.73
GSMUA_Achr3P08410_001	Banana	cytosol	59.74	55.64
GSMUA_Achr10P...	Banana	cytosol	58.42	55.5
TraesCS5B01G082500.1	Wheat	cytosol	55.79	55.35
TraesCS5D01G089900.1	Wheat	cytosol	55.53	55.24
CDY20937	Canola	cytosol	54.21	55.23
Zm00001d008171_P001	Maize	cytosol	57.11	54.8
TraesCS5A01G076600.1	Wheat	cytosol	55.26	54.69
CDX93640	Canola	cytosol	53.68	54.4
Bra018701.1-P	Field mustard	cytosol	53.68	54.4
EES17660	Sorghum	cytosol, peroxisome, plastid	57.37	54.36
EES02832	Sorghum	cytosol	56.58	53.62
PGSC0003DMT400069839	Potato	cytosol	55.0	52.25
Zm00001d024732_P001	Maize	cytosol	55.53	52.1
HORVU5Hr1G020300.3	Barley	plastid	52.63	51.68
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	54.74	50.61
KRH62979	Soybean	cytosol	21.32	50.31
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	53.95	48.58
CDX95863	Canola	golgi, mitochondrion	49.74	45.11
KRH51582	Soybean	cytosol	44.21	43.64
KRH20243	Soybean	cytosol	42.89	42.56
KRH28935	Soybean	nucleus	41.84	42.51
KRH76528	Soybean	cytosol	41.58	42.25
KRH03568	Soybean	cytosol	42.37	42.04
CDX92122	Canola	mitochondrion	37.37	42.01
KRH60899	Soybean	cytosol	35.53	40.91
KRH37886	Soybean	cytosol	40.79	40.68
KRH12874	Soybean	cytosol	40.53	40.63
KRH52505	Soybean	cytosol	38.95	40.0
KRH61828	Soybean	cytosol	38.95	40.0
Bra022205.1-P	Field mustard	mitochondrion	27.11	39.02
KRH52312	Soybean	cytosol	25.53	28.12
KRH15637	Soybean	cytosol	23.68	26.55
KRH61653	Soybean	cytosol	9.47	26.47
KRH44580	Soybean	endoplasmic reticulum	24.74	25.54
KRH47317	Soybean	cytosol	24.74	25.54
KRH05380	Soybean	golgi	23.68	25.28
KRH39122	Soybean	cytosol	21.58	25.23
KRH61652	Soybean	cytosol	11.32	22.28
KRH48594	Soybean	cytosol, peroxisome, plastid	13.42	20.99
KRH71677	Soybean	cytosol	26.32	15.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100775577	MapMan:15.5.38	Gene3D:3.60.40.10	EMBL:ACUP02010305
EnsemblPlantsGene:GLYMA_17G038000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1MRV7	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH02420	ProteinID:KRH02420	ProteinID:KRH02420.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF316
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233EF67	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:-:2806050..2808803

Molecular Weight (calculated)

41711.0 Da

IEP (calculated)

4.884

GRAVY (calculated)

-0.022

Length

380 amino acids

Sequence
(BLAST)

001: MVAEAEIICQ QNIPMLDVKY HICVAQEHNV KVEVSPKSPS PPVPIFGQAV SCSEIIKDSI LEAPAMNFFP NVRSGSYAEI GPRVSMDDEH ICIDDLGAHL
101: GFVFKCPIPS AFYAVFDGHG GPDAAAFVKR NAMRLFFEDA DMLQSYDADA FFLQKLEDSH RRAFLRADLA LADEQTVGSS CGTTALTALV LGRHLLVANA
201: GDCRAVLCRR GVAVEMSNDH RPSYLPEKRR VEELGGFIDD GYLNGYLSVT RALGDWDLKF PLGAASPLIA EPDVRLVTLT EGDEFLIIGC DGIWDVMSSQ
301: VAVSLVRRGL RRHDDPQQCA GELVKEALRL NTSDNLTVIV VCLSPIESIV ESCPPQRRRF KACSLSEEAR NRLKSLIEGN

Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)

001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE

Arabidopsis Description

Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.