CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018701.1-P	Field mustard	cytosol	99.47	99.47
CDY20937	Canola	cytosol	96.0	96.51
AT1G48040.1	Thale cress	cytosol	86.13	84.33
CDX95863	Canola	golgi, mitochondrion	64.27	57.52
CDX92122	Canola	mitochondrion	50.4	55.92
GSMUA_AchrUn_...	Banana	cytosol	42.93	54.58
KRH02420	Soybean	cytosol	54.4	53.68
KRH50630	Soybean	cytosol	54.67	53.11
VIT_05s0020g00390.t01	Wine grape	plastid	55.2	53.08
KRH36917	Soybean	cytosol	56.8	52.59
TraesCS5D01G089900.1	Wheat	cytosol	52.8	51.83
TraesCS5A01G076600.1	Wheat	cytosol	53.07	51.82
TraesCS5B01G082500.1	Wheat	cytosol	52.53	51.44
Os05t0134200-01	Rice	cytosol	52.8	50.9
CDY11411	Canola	cytosol	50.4	50.53
Os01t0295700-01	Rice	cytosol	51.2	50.53
GSMUA_Achr8P22250_001	Banana	cytosol	49.6	50.41
HORVU5Hr1G020300.3	Barley	plastid	51.73	50.13
TraesCS1B01G095600.1	Wheat	cytosol	51.2	50.0
HORVU1Hr1G016640.2	Barley	cytosol	50.93	50.0
CDX76624	Canola	cytosol	49.87	49.87
TraesCS1D01G079600.1	Wheat	cytosol	50.67	49.74
CDX93981	Canola	cytosol	49.87	49.73
CDY37787	Canola	cytosol	48.53	49.59
TraesCS1A01G077500.1	Wheat	cytosol	50.67	49.48
GSMUA_Achr3P08410_001	Banana	cytosol	53.33	49.02
GSMUA_Achr10P...	Banana	cytosol	52.27	49.0
Zm00001d008171_P001	Maize	cytosol	51.47	48.74
EES17660	Sorghum	cytosol, peroxisome, plastid	52.0	48.63
EES02832	Sorghum	cytosol	50.93	47.63
PGSC0003DMT400069839	Potato	cytosol	50.4	47.25
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.93	46.47
Zm00001d024732_P001	Maize	cytosol	50.13	46.42
CDY16304	Canola	nucleus	38.4	40.56
CDY17190	Canola	cytosol	40.27	40.27
CDX73719	Canola	nucleus	38.4	39.89
CDY33277	Canola	nucleus	37.87	39.78
CDX78007	Canola	nucleus	38.13	39.61
CDY27953	Canola	cytosol	39.73	39.01
CDY37699	Canola	cytosol	39.73	38.6
CDY53789	Canola	cytosol	39.47	38.44
CDY11515	Canola	mitochondrion	37.6	37.11
CDX76745	Canola	nucleus	37.6	35.97
CDY66303	Canola	plastid	49.87	29.64
CDY53471	Canola	nucleus	26.67	27.47
CDY13457	Canola	cytosol	25.07	26.7
CDX76775	Canola	nucleus	25.33	26.61
CDY64719	Canola	nucleus	25.87	26.58
CDY64720	Canola	nucleus	25.87	26.58
CDX72331	Canola	cytosol	24.8	26.42
CDY26191	Canola	cytosol	24.53	25.34
CDY34740	Canola	nucleus	25.07	23.74
CDY19191	Canola	cytosol, nucleus, peroxisome	24.53	23.41
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.27	20.81
CDY22485	Canola	cytosol	24.8	14.16
CDY35434	Canola	cytosol, plastid	24.0	13.7

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078DWE2	EnsemblPlants:CDX93640
ProteinID:CDX93640	ProteinID:CDX93640.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00156323001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EE6AD1
SEG:seg	:	:	:	:	:

Description

BnaA06g04080D

Coordinates

chrLK031876:-:1057604..1059442

Molecular Weight (calculated)

41410.7 Da

IEP (calculated)

4.599

GRAVY (calculated)

-0.192

Length

375 amino acids

Sequence
(BLAST)

001: MILSQPEIRV LDVKCHISSA AKEQNSFRVS ESVRAQTSDS AETPRFESGM SFATTSIEEP TIEFFPTIRS GSFADIRGRE TMEDEHICID DLSSQFRSLN
101: FSLPSAFYGV FDGHGGPEAS LYMKENLTRL FFQDSVFPEM PSVVDSFFLQ ELENSHRKAF ALADLAMADE SIVSGSCGTT ALTALIVGRH LLVANAGDCR
201: AVLCRRGVAV DMSFDHRSTY EPERRRIEDL GGYFEDGYLN GVLAVTRAIG DWELKSPFSG SSSSPLISDP DIQQIILTED DEFLILACDG IWDVLSSQNA
301: VSNVRQGLRR HGDPRQSAME LGKEAARLNS SDNLTVVVIC FSSVLASTQQ PQRRRLRFCV SDEARARLQA MLGGD

Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)

001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE

Arabidopsis Description

Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.