CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76624	Canola	cytosol	89.36	89.6
CDY11411	Canola	cytosol	88.83	89.3
AT3G62260.2	Thale cress	cytosol	79.79	78.12
CDY37787	Canola	cytosol	69.41	71.12
GSMUA_AchrUn_...	Banana	cytosol	46.28	58.98
Os05t0134200-01	Rice	cytosol	58.24	56.3
GSMUA_Achr8P22250_001	Banana	cytosol	54.52	55.56
Os01t0295700-01	Rice	cytosol	55.85	55.26
GSMUA_Achr10P...	Banana	cytosol	58.78	55.25
HORVU1Hr1G016640.2	Barley	cytosol	55.85	54.97
TraesCS5D01G089900.1	Wheat	cytosol	55.59	54.71
TraesCS1D01G079600.1	Wheat	cytosol	55.59	54.71
TraesCS1A01G077500.1	Wheat	cytosol	55.85	54.69
TraesCS5B01G082500.1	Wheat	cytosol	55.59	54.57
TraesCS1B01G095600.1	Wheat	cytosol	55.59	54.43
TraesCS5A01G076600.1	Wheat	cytosol	55.59	54.43
EES17660	Sorghum	cytosol, peroxisome, plastid	57.98	54.36
GSMUA_Achr3P08410_001	Banana	cytosol	58.51	53.92
Zm00001d008171_P001	Maize	cytosol	56.65	53.79
CDY66303	Canola	plastid	90.16	53.72
Zm00001d024732_P001	Maize	cytosol	57.71	53.58
EES02832	Sorghum	cytosol	56.91	53.37
HORVU5Hr1G020300.3	Barley	plastid	53.19	51.68
CDX93640	Canola	cytosol	49.73	49.87
CDY20937	Canola	cytosol	48.94	49.33
CDY16304	Canola	nucleus	43.62	46.2
CDY33277	Canola	nucleus	43.62	45.94
CDX73719	Canola	nucleus	43.88	45.71
CDX78007	Canola	nucleus	43.62	45.43
CDX95863	Canola	golgi, mitochondrion	50.53	45.35
CDY17190	Canola	cytosol	45.21	45.33
CDY27953	Canola	cytosol	45.48	44.76
CDY53789	Canola	cytosol	45.21	44.16
CDY37699	Canola	cytosol	44.95	43.78
CDY11515	Canola	mitochondrion	41.22	40.79
CDX76745	Canola	nucleus	42.29	40.56
CDX92122	Canola	mitochondrion	36.44	40.53
CDY13457	Canola	cytosol	22.61	24.15
CDX72331	Canola	cytosol	22.61	24.15
CDX76775	Canola	nucleus	22.87	24.09
CDY26191	Canola	cytosol	23.14	23.97
CDY53471	Canola	nucleus	22.61	23.35
CDY64720	Canola	nucleus	22.61	23.29
CDY64719	Canola	nucleus	22.61	23.29
CDY19191	Canola	cytosol, nucleus, peroxisome	23.14	22.14
CDY34740	Canola	nucleus	22.61	21.46
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.17	19.0
CDY22485	Canola	cytosol	27.93	15.98
CDY35434	Canola	cytosol, plastid	26.6	15.22

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078DXH7	EnsemblPlants:CDX93981
ProteinID:CDX93981	ProteinID:CDX93981.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00156838001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF519	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EEE637
SEG:seg	:	:	:	:	:

Description

BnaC04g21400D

Coordinates

chrLK031878:+:1133022..1134868

Molecular Weight (calculated)

40763.4 Da

IEP (calculated)

4.661

GRAVY (calculated)

-0.102

Length

376 amino acids

Sequence
(BLAST)

001: MVAEAEVVFQ QSLPVVLDID GVSSAVISPL SSPKLGIRRS TASVPGGLST SPVGLKQEDG CDSSVPVYVP AIRSGSYADI GPKRFMEDEH ICVDDLSSQV
101: GCLSELPNPS AFYAVFDGHG GSEAATYVKQ NAIRLFFEDD KFPQTSEVNS VYVEEVKSSL RNAFLQADLA LAEEGSISSS SGTTALAALI FGRLLMVANA
201: GDCRAVLCRK GRAIEMSHDH RPINLLERRR VEESGGVFED GYLNGELSVT RALGDWDMKR TPHGSSKSPL ISEPEIKQTA LTEEDEFLVM GCDGIWDVLT
301: SQEAVSIVKR GLNRHDDPAR CARELVMEAL RLNSFDNLTA VVVSFVTGER VVPLEKKRCF SLTPEAFRSL RSLLDG

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.