CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024732_P001	Maize	cytosol	89.28	88.4
Os05t0134200-01	Rice	cytosol	85.04	87.66
TraesCS1A01G077500.1	Wheat	cytosol	82.04	85.68
HORVU1Hr1G016640.2	Barley	cytosol	81.55	85.6
TraesCS1D01G079600.1	Wheat	cytosol	81.05	85.08
TraesCS1B01G095600.1	Wheat	cytosol	81.05	84.64
GSMUA_AchrUn_...	Banana	cytosol	52.12	70.85
EES02832	Sorghum	cytosol	67.58	67.58
PGSC0003DMT400018825	Potato	cytosol	56.11	63.92
Solyc06g009390.2.1	Tomato	cytosol	55.86	63.64
Solyc01g068000.2.1	Tomato	cytosol	55.61	63.35
PGSC0003DMT400013370	Potato	cytosol	55.11	62.78
KRH31749	Soybean	cytosol	59.6	60.35
VIT_07s0005g02110.t01	Wine grape	cytosol	58.1	59.14
CDY11411	Canola	cytosol	55.11	59.09
Bra007669.1-P	Field mustard	cytosol	55.11	59.09
KRH69165	Soybean	cytosol	58.1	58.84
CDX76624	Canola	cytosol	54.61	58.4
CDY37787	Canola	cytosol	53.37	58.31
CDX93981	Canola	cytosol	54.36	57.98
KRH02420	Soybean	cytosol	54.36	57.37
AT3G62260.2	Thale cress	cytosol	54.36	56.77
KRH50630	Soybean	cytosol	53.87	55.96
VIT_05s0020g00390.t01	Wine grape	plastid	52.62	54.1
KRH36917	Soybean	cytosol	54.11	53.58
CDY20937	Canola	cytosol	48.88	52.55
Bra018701.1-P	Field mustard	cytosol	48.63	52.0
CDX93640	Canola	cytosol	48.63	52.0
AT1G48040.1	Thale cress	cytosol	49.63	51.96
PGSC0003DMT400069839	Potato	cytosol	48.88	49.0
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	48.63	47.45
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	47.63	45.26
KXG39006	Sorghum	plastid	41.65	44.89
EER88596	Sorghum	cytosol, plastid	39.9	44.44
EES05962	Sorghum	cytosol	39.15	44.23
EER89322	Sorghum	cytosol	38.65	43.79
CDX95863	Canola	golgi, mitochondrion	45.14	43.2
Bra014405.1-P	Field mustard	cytosol	46.38	39.83
CDX92122	Canola	mitochondrion	33.42	39.65
Bra022205.1-P	Field mustard	mitochondrion	23.69	35.98
CDY66303	Canola	plastid	53.62	34.07
KXG32675	Sorghum	cytosol	4.99	31.75
KXG36172	Sorghum	cytosol	24.94	27.55
EER90135	Sorghum	cytosol	23.44	25.68
EES04637	Sorghum	cytosol	21.95	24.51
EER98699	Sorghum	cytosol, peroxisome, plastid	21.95	24.44
KXG26265	Sorghum	cytosol	18.95	22.09
OQU81890	Sorghum	plastid	22.19	20.14
KXG30563	Sorghum	mitochondrion	18.2	17.8
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	8.23	15.28

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	EntrezGene:8068186	UniProt:C5YZI2
EnsemblPlants:EES17660	ProteinID:EES17660	ProteinID:EES17660.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF376	SMART:SM00331	SMART:SM00332
EnsemblPlantsGene:SORBI_3009G032400	SUPFAM:SSF81606	unigene:Sbi.4606	UniParc:UPI0001A88E0B	RefSeq:XP_002439230.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:2927862..2931266

Molecular Weight (calculated)

43767.0 Da

IEP (calculated)

4.359

GRAVY (calculated)

-0.062

Length

401 amino acids

Sequence
(BLAST)

001: MVAEAEVMHQ TPVPVLEVQY HRCVTTKGVE DVVGMSAAAA AAVAAPAEVG VEVEVEVEVE VEVAVEVPLM GLEQPDAAPS VSMDVLQFVP TIRSGSFADI
101: GPRRYMEDEH IRIDDLSAHL GSLLVCPLPS AFYGVFDGHG GPDAAAYMKR HAMRFLFEDS EFPQASQVDE MYVQSVESSV RRAFLQADLA LADDLDISRS
201: SGTTALTALV FGRQLLVANA GDCRAVLCRK GVAMEMSRDH RANYVEECER VAASGGYIED GYLNGVLSVT RALGDWDMKT PDASVSPLIA EPEFRQATLG
301: EDDEFLIMGC DGIWDVMTSQ HAVSLVRRGL RQHDDPARCA RELVMEAKRL ETADNLTVIV VCFASEMGSQ QQEQPVRPRS CKGLSTEALC NLRSWLETDH
401: R

Best Arabidopsis Sequence Match ( AT3G62260.2 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVQADI FPEGDCDPSV LDYIPTIRSG SFADIGPKRN MEDEHIRIDD
101: LSSQVGSLFE LPKPSAFYAV FDGHGGPEAA AYVRENAIRF FFEDEQFPQT SEVSSVYVEE VETSLRNAFL QADLALAEDC SISDSCGTTA LTALICGRLL
201: MVANAGDCRA VLCRKGRAID MSEDHKPINL LERRRVEESG GFITNDGYLN EVLAVTRALG DWDLKLPHGS QSPLISEPEI KQITLTEDDE FLVIGCDGIW
301: DVLTSQEAVS IVRRGLNRHN DPTRCARELV MEALGRNSFD NLTAVVVCFM TMDRGDKPVV PLEKRRCFSL SPEAFCSLRN LLDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.