Factsheet for PGSC0003DMT400018825

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009390.2.1	Tomato	cytosol	97.73	97.73
PGSC0003DMT400013370	Potato	cytosol	81.82	81.82
KRH31749	Soybean	cytosol	76.14	67.68
GSMUA_AchrUn_...	Banana	cytosol	56.53	67.46
VIT_07s0005g02110.t01	Wine grape	cytosol	75.28	67.26
KRH69165	Soybean	cytosol	75.28	66.92
GSMUA_Achr10P...	Banana	cytosol	68.75	60.5
Os05t0134200-01	Rice	cytosol	66.48	60.15
GSMUA_Achr8P22250_001	Banana	cytosol	62.78	59.89
GSMUA_Achr3P08410_001	Banana	cytosol	69.32	59.8
Os01t0295700-01	Rice	cytosol	63.35	58.68
TraesCS5D01G089900.1	Wheat	cytosol	63.64	58.64
TraesCS5B01G082500.1	Wheat	cytosol	63.35	58.22
HORVU1Hr1G016640.2	Barley	cytosol	63.07	58.12
TraesCS1D01G079600.1	Wheat	cytosol	63.07	58.12
TraesCS1B01G095600.1	Wheat	cytosol	63.35	58.07
TraesCS5A01G076600.1	Wheat	cytosol	63.07	57.81
TraesCS1A01G077500.1	Wheat	cytosol	63.07	57.81
EES02832	Sorghum	cytosol	64.77	56.86
Zm00001d008171_P001	Maize	cytosol	63.64	56.57
HORVU5Hr1G020300.3	Barley	plastid	61.93	56.33
EES17660	Sorghum	cytosol, peroxisome, plastid	63.92	56.11
Zm00001d024732_P001	Maize	cytosol	63.64	55.31
PGSC0003DMT400069839	Potato	cytosol	57.67	50.75
PGSC0003DMT400059610	Potato	cytosol	46.59	44.2
PGSC0003DMT400025874	Potato	cytosol	47.73	43.64
PGSC0003DMT400020228	Potato	cytosol	44.6	40.99
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	44.6	40.89
PGSC0003DMT400078867	Potato	nucleus	43.18	39.69
PGSC0003DMT400067098	Potato	cytosol, plastid	41.76	39.2
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	18.18	31.07
PGSC0003DMT400014727	Potato	peroxisome	23.01	23.96

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102592367	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1AB70	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400007297
PGSC:PGSC0003DMG400007297	EnsemblPlants:PGSC0003DMT400018825	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000295B2B1	RefSeq:XP_006355829.1	SEG:seg	:	:

Description

Protein phosphatase-2C [Source:PGSC_GENE;Acc:PGSC0003DMG400007297]

Coordinates

chr6:+:310794..315419

Molecular Weight (calculated)

38812.2 Da

IEP (calculated)

4.712

GRAVY (calculated)

-0.107

Length

352 amino acids

Sequence
(BLAST)

001: MVAGAEVMVP VQQTITVLDV PGCSDVVSNS PDTTILQFVP SIRSGSFADI GPRRFMEDEH IRIDDLSAHQ GSLVRFPKPC AFYGVFDGHG GPEAAAYVRK
101: HVLRFLFEET NFPQTSEVDD TFLKEVKNSV REGFLLADLA LADECSVSSS SGTTALTALI LGRLLMVANV GDCRAVLCHK GEAVNMSQDH RPNYASERRR
201: VEELGGFIDD GYLNGVLSVT RALGDWDMKL PRGSASPLIA EPEIRQIILT EDDEFLIIGC DGIWDVMSSQ QAVNLVRRGL RRHDDPEQCA KDLVMEALRL
301: STFDNLTVVI VCFTSLDHPE PSQSRQRRLR CCSFSAEALC SLQSWLDNSG SR

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.