Factsheet for PGSC0003DMT400059610

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	79.78	77.08
VIT_07s0031g02160.t01	Wine grape	cytosol	72.51	74.52
Bra036796.1-P	Field mustard	nucleus	63.07	74.29
CDY16304	Canola	nucleus	67.39	70.42
CDY33277	Canola	nucleus	67.39	70.03
CDX73719	Canola	nucleus	67.92	69.81
CDX78007	Canola	nucleus	67.66	69.53
Bra038901.1-P	Field mustard	nucleus	66.58	69.19
AT3G51470.1	Thale cress	nucleus	66.58	68.42
KRH28935	Soybean	nucleus	66.58	66.04
KRH76528	Soybean	cytosol	65.77	65.24
GSMUA_Achr11P...	Banana	plastid	62.53	62.37
GSMUA_Achr9P23890_001	Banana	plastid	62.53	61.87
TraesCS1A01G202300.1	Wheat	plastid	61.46	61.62
TraesCS1B01G216500.1	Wheat	plastid	61.19	61.35
GSMUA_Achr4P25900_001	Banana	cytosol	63.07	61.26
TraesCS1D01G205700.1	Wheat	plastid	60.92	61.08
Zm00001d000391_P002	Maize	plastid	60.38	60.22
KXG39006	Sorghum	plastid	60.38	60.22
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	61.46	59.53
PGSC0003DMT400025874	Potato	cytosol	61.73	59.48
Zm00001d029772_P001	Maize	plastid	60.11	59.47
HORVU1Hr1G052160.1	Barley	plastid	60.92	56.64
GSMUA_AchrUn_...	Banana	cytosol	64.42	53.23
PGSC0003DMT400018825	Potato	cytosol	44.2	46.59
PGSC0003DMT400013370	Potato	cytosol	44.2	46.59
PGSC0003DMT400067098	Potato	cytosol, plastid	46.36	45.87
PGSC0003DMT400020228	Potato	cytosol	45.28	43.86
PGSC0003DMT400078867	Potato	nucleus	45.01	43.6
PGSC0003DMT400069839	Potato	cytosol	41.51	38.5
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	17.25	31.07
PGSC0003DMT400014727	Potato	peroxisome	19.95	21.89

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1C4H2	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400023163	PGSC:PGSC0003DMG400023163	EnsemblPlants:PGSC0003DMT400059610	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF304	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002966ABC	SEG:seg	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400023163]

Coordinates

chr2:+:18945384..18950634

Molecular Weight (calculated)

40474.2 Da

IEP (calculated)

5.306

GRAVY (calculated)

-0.355

Length

371 amino acids

Sequence
(BLAST)

001: MENGFCKEDL SDIEENQEEL DQSSQSNIGK PPRNTTGMRH CISQATLAGA SPLESPTQIL PLKSSSSDDS GYVPIFRSGS YSEIGPKPNM EDEHICINDL
101: CKHIGSSKGL LSPGAFYGVF DGHGGIDAAS FTQKNLLSFI VEDMHFPSMV KRAIRNAFVK ADNALADTQS LDNTSGTTAL TALILGRTML IANAGDSRAV
201: LGKRGRAIEL SKDHKPNTTS EKLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGPKGSKG PLSSEPELEE LVLSEEDEFL IMGCDGLWDV MSSQYAVTIV
301: RKELMLHNDP ERCSKELVRE ALKRNTCDNL TVLVVCFSHD PPPRIEIPRT QRKRSISAEG LDLLKGVLSD I

Best Arabidopsis Sequence Match ( AT3G51470.1 )
(BLAST)

001: MAPVTEVSPM INTLEVADDK MTNLSSSGKP PRNISAMRHC NSTAWLTDYE GDERFGAKSP EGVNSTFQPV FRSGSWSDKG PKQSMEDEFI CVDDLTEYIG
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L

Arabidopsis Description

Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.