CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78007	Canola	nucleus	99.17	99.17
Bra036796.1-P	Field mustard	nucleus	85.87	98.41
AT3G51470.1	Thale cress	nucleus	91.41	91.41
CDY33277	Canola	nucleus	89.47	90.48
CDY16304	Canola	nucleus	88.92	90.42
VIT_07s0031g02160.t01	Wine grape	cytosol	71.19	71.19
PGSC0003DMT400059610	Potato	cytosol	69.81	67.92
KRH28935	Soybean	nucleus	69.81	67.38
KRH76528	Soybean	cytosol	69.53	67.11
Solyc02g082490.2.1	Tomato	cytosol	68.7	64.58
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	68.7	64.58
GSMUA_Achr11P...	Banana	plastid	64.82	62.9
GSMUA_Achr4P25900_001	Banana	cytosol	64.82	61.26
TraesCS1A01G202300.1	Wheat	plastid	62.33	60.81
TraesCS1B01G216500.1	Wheat	plastid	62.05	60.54
KXG39006	Sorghum	plastid	62.33	60.48
TraesCS1D01G205700.1	Wheat	plastid	61.77	60.27
Zm00001d000391_P002	Maize	plastid	62.05	60.22
CDY37699	Canola	cytosol	63.99	59.84
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	63.16	59.53
CDY53789	Canola	cytosol	63.43	59.48
Zm00001d029772_P001	Maize	plastid	61.77	59.47
CDY17190	Canola	cytosol	61.5	59.2
GSMUA_Achr9P23890_001	Banana	plastid	61.22	58.93
CDY27953	Canola	cytosol	61.5	58.12
HORVU1Hr1G052160.1	Barley	plastid	61.77	55.89
GSMUA_AchrUn_...	Banana	cytosol	65.37	52.56
CDY11411	Canola	cytosol	45.71	44.12
CDX76624	Canola	cytosol	45.71	44.0
CDX93981	Canola	cytosol	45.71	43.88
CDY11515	Canola	mitochondrion	45.71	43.42
CDX76745	Canola	nucleus	47.09	43.37
CDY37787	Canola	cytosol	43.21	42.51
CDY20937	Canola	cytosol	40.72	39.41
CDX93640	Canola	cytosol	39.89	38.4
CDX95863	Canola	golgi, mitochondrion	36.84	31.74
CDX92122	Canola	mitochondrion	25.21	26.92
CDX76775	Canola	nucleus	26.59	26.89
CDY26191	Canola	cytosol	26.59	26.45
CDY13457	Canola	cytosol	25.76	26.42
CDX72331	Canola	cytosol	25.48	26.14
CDY64720	Canola	nucleus	26.04	25.75
CDY64719	Canola	nucleus	26.04	25.75
CDY53471	Canola	nucleus	25.76	25.55
CDY66303	Canola	plastid	43.77	25.04
CDY19191	Canola	cytosol, nucleus, peroxisome	26.87	24.68
CDY34740	Canola	nucleus	26.87	24.49
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.4	23.53
CDY22485	Canola	cytosol	28.81	15.83
CDY35434	Canola	cytosol, plastid	27.98	15.37

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:A0A078CBY7
EnsemblPlants:CDX73719	ProteinID:CDX73719	ProteinID:CDX73719.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00109317001	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF304	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0004EE9780	SEG:seg	:	:	:	:

Description

BnaC08g22840D

Coordinates

chrLK031799:+:2318749..2320431

Molecular Weight (calculated)

39569.1 Da

IEP (calculated)

5.642

GRAVY (calculated)

-0.403

Length

361 amino acids

Sequence
(BLAST)

001: MAPETEVSPM VNNLEAGDDN MTHLSSSGKP PRNLSAMRHC NSTAWLIDSE GEERFGLKSP EGQNSTWEPV FRSGSWSDKG PKRSMEDEFI CVDDLKEHIG
101: SSPGAFYGVF DGHGGVDAAL FTKKNLLKLL TEDKHFPTNT KKATRSAFVK TDHALADAPS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLAEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: EKCSQALVKE ALQRNSCDNL TVVVVCFSLE PPPRIEIPKS HKRRSISAEG LDLLKGVLND L

Best Arabidopsis Sequence Match ( AT3G51470.1 )
(BLAST)

001: MAPVTEVSPM INTLEVADDK MTNLSSSGKP PRNISAMRHC NSTAWLTDYE GDERFGAKSP EGVNSTFQPV FRSGSWSDKG PKQSMEDEFI CVDDLTEYIG
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L

Arabidopsis Description

Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.