CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17190	Canola	cytosol	95.55	97.33
Bra005481.1-P	Field mustard	cytosol	95.29	96.81
CDY37699	Canola	cytosol	89.79	88.86
CDY53789	Canola	cytosol	89.27	88.57
AT2G33700.1	Thale cress	cytosol	84.29	84.74
GSMUA_Achr11P...	Banana	plastid	64.92	66.67
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	64.92	64.75
GSMUA_Achr9P23890_001	Banana	plastid	63.09	64.27
CDY16304	Canola	nucleus	58.38	62.82
TraesCS1A01G202300.1	Wheat	plastid	60.73	62.7
GSMUA_Achr4P25900_001	Banana	cytosol	62.57	62.57
TraesCS1D01G205700.1	Wheat	plastid	60.47	62.43
CDY33277	Canola	nucleus	58.12	62.18
TraesCS1B01G216500.1	Wheat	plastid	60.21	62.16
CDX78007	Canola	nucleus	58.64	62.05
CDX73719	Canola	nucleus	58.12	61.5
KXG39006	Sorghum	plastid	59.42	61.02
Zm00001d000391_P002	Maize	plastid	59.42	61.02
Zm00001d029772_P001	Maize	plastid	59.42	60.53
HORVU1Hr1G052160.1	Barley	plastid	60.21	57.64
GSMUA_AchrUn_...	Banana	cytosol	65.44	55.68
CDY37787	Canola	cytosol	44.76	46.59
CDY11515	Canola	mitochondrion	45.29	45.53
CDX93981	Canola	cytosol	44.76	45.48
CDY11411	Canola	cytosol	43.98	44.92
CDX76624	Canola	cytosol	43.72	44.53
CDX76745	Canola	nucleus	45.29	44.13
CDY20937	Canola	cytosol	39.27	40.21
CDX93640	Canola	cytosol	39.01	39.73
CDX95863	Canola	golgi, mitochondrion	36.65	33.41
CDX92122	Canola	mitochondrion	26.44	29.88
CDX76775	Canola	nucleus	26.18	28.01
CDX72331	Canola	cytosol	24.87	26.99
CDY13457	Canola	cytosol	24.87	26.99
CDY64720	Canola	nucleus	25.65	26.85
CDY64719	Canola	nucleus	25.65	26.85
CDY26191	Canola	cytosol	25.39	26.72
CDY53471	Canola	nucleus	25.39	26.65
CDY66303	Canola	plastid	42.93	25.99
CDY34740	Canola	nucleus	26.44	25.51
CDY19191	Canola	cytosol, nucleus, peroxisome	25.13	24.43
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.57	21.72
CDY22485	Canola	cytosol	27.49	15.98
CDY35434	Canola	cytosol, plastid	26.96	15.68

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	GO:A0A078GTH2
UniProt:A0A078GTH2	EnsemblPlants:CDY27953	ProteinID:CDY27953	ProteinID:CDY27953.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00038872001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF528
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EDFA73	SEG:seg	:

Description

BnaCnng05380DBnaCnng05380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTH2]

Coordinates

chrLK032212:-:497976..500205

Molecular Weight (calculated)

41886.9 Da

IEP (calculated)

5.052

GRAVY (calculated)

-0.205

Length

382 amino acids

Sequence
(BLAST)

001: MIGMDFSPLI TVLEGDFNMD NASSTETDTL DDSTKLMSSK GKPPRHLSSM QRITTTTTSR LQVAVTADLD VCKSPDEKSD FLPVYRSGSC AEQGAKQFME
101: DEHICIDDLV DHLGASLDSS SLSAFYGVFD GHGGTDAALF VRKNILRFII EDTYFPLCVK KAIKNAFLKA DYQFADDSSL DISSGTTALA ALIFGRRLII
201: ANAGDCRAVL GRRGRAIELS KDHKPNCITE KTRIENLGGV VYDGYLNGQL SVSRAIGDWH MKGPRGSACP LTPEPELQET DLSEADEFLI MGCDGLWDVM
301: SSQCAVTIAR KALMIHNDPE RCSRELVREA LKRNTCDNLT VVVVCFSPDP PQRIEVRVQS RVRRSISADG LNLLKGVLDG YP

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.