Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025933.1-P | Field mustard | cytosol | 92.37 | 95.03 |
| CDY26191 | Canola | cytosol | 87.28 | 94.49 |
| AT1G18030.1 | Thale cress | cytosol, nucleus, peroxisome | 75.32 | 84.33 |
| CDY26194 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.02 | 78.28 |
| GSMUA_Achr9P21740_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 53.44 | 66.46 |
| KRH39122 | Soybean | cytosol | 52.93 | 64.0 |
| VIT_17s0000g03100.t01 | Wine grape | cytosol, peroxisome, plastid | 59.03 | 61.38 |
| Solyc03g118890.2.1 | Tomato | cytosol, nucleus, peroxisome | 46.82 | 60.73 |
| PGSC0003DMT400014727 | Potato | peroxisome | 50.38 | 58.58 |
| CDY16304 | Canola | nucleus | 24.43 | 27.04 |
| CDY33277 | Canola | nucleus | 24.43 | 26.89 |
| CDX78007 | Canola | nucleus | 24.68 | 26.87 |
| CDX73719 | Canola | nucleus | 24.68 | 26.87 |
| CDY37699 | Canola | cytosol | 24.94 | 25.39 |
| CDY20937 | Canola | cytosol | 23.92 | 25.2 |
| CDY53789 | Canola | cytosol | 24.68 | 25.19 |
| CDY27953 | Canola | cytosol | 24.43 | 25.13 |
| CDY17190 | Canola | cytosol | 23.92 | 25.07 |
| CDX93640 | Canola | cytosol | 23.41 | 24.53 |
| CDX76775 | Canola | nucleus | 21.63 | 23.81 |
| CDY53471 | Canola | nucleus | 21.88 | 23.63 |
| CDY37787 | Canola | cytosol | 21.63 | 23.16 |
| CDX93981 | Canola | cytosol | 22.14 | 23.14 |
| CDY64720 | Canola | nucleus | 21.37 | 23.01 |
| CDY64719 | Canola | nucleus | 21.37 | 23.01 |
| CDX72331 | Canola | cytosol | 20.61 | 23.01 |
| CDY13457 | Canola | cytosol | 20.61 | 23.01 |
| CDY11411 | Canola | cytosol | 21.88 | 22.99 |
| CDX76624 | Canola | cytosol | 21.88 | 22.93 |
| CDY11515 | Canola | mitochondrion | 21.88 | 22.63 |
| CDX76745 | Canola | nucleus | 21.88 | 21.94 |
| CDY34740 | Canola | nucleus | 21.37 | 21.21 |
| CDX95863 | Canola | golgi, mitochondrion | 20.36 | 19.09 |
| CDX92122 | Canola | mitochondrion | 13.49 | 15.68 |
| CDY66303 | Canola | plastid | 21.63 | 13.47 |
| CDY22485 | Canola | cytosol | 21.63 | 12.94 |
| CDY35434 | Canola | cytosol, plastid | 21.12 | 12.63 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | GO:A0A078G1L1 | UniProt:A0A078G1L1 |
| EnsemblPlants:CDY19191 | ProteinID:CDY19191 | ProteinID:CDY19191.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00006487001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF348 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0004EEA60F | SEG:seg | : | : | : |
Description
BnaC05g13920DBnaC05g13920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1L1]
Coordinates
chrLK032093:+:71467..73629
Molecular Weight (calculated)
42981.3 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.300
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKQPNQKQA ADSFSSEDMI SPPAKKAKKS EETGCDNTKD PRISSGAGEE MQEIPSGGEE VIAAVDNRAA EEGSSSCISE EKKGFVFEAD VAEDKGARQA
101: MEDVSVLLPD ASLDFPGELR CGHFAIYDGH GGRLAAEFAK KHLHLNVLSS GLPRELVSHQ LLSRLFLDPN LRLLLQMDLK VAKKAILDGF RKTDELLLQE
201: SVSVLTFVYG SGGWQDGATA VCVWIVDQKV FIANIGDAKA VLARSSTTNE SGSHTEACNP LKAIVLTREH KAIYPQERSR IQKSGGVVSS NGRIQGRLEV
301: SRAFGDRQFK KFGVIATPDI HAFELTEREN FMILGCDGLW EVFGPSDAVG YVQKLLKEGL PVSTISRRLV KEAVKERRCK DNCTAIVIVF RRG
101: MEDVSVLLPD ASLDFPGELR CGHFAIYDGH GGRLAAEFAK KHLHLNVLSS GLPRELVSHQ LLSRLFLDPN LRLLLQMDLK VAKKAILDGF RKTDELLLQE
201: SVSVLTFVYG SGGWQDGATA VCVWIVDQKV FIANIGDAKA VLARSSTTNE SGSHTEACNP LKAIVLTREH KAIYPQERSR IQKSGGVVSS NGRIQGRLEV
301: SRAFGDRQFK KFGVIATPDI HAFELTEREN FMILGCDGLW EVFGPSDAVG YVQKLLKEGL PVSTISRRLV KEAVKERRCK DNCTAIVIVF RRG
001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V
Arabidopsis Description
Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.