Factsheet for Bra025933.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26191	Canola	cytosol	92.67	97.52
CDY19191	Canola	cytosol, nucleus, peroxisome	95.03	92.37
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	78.01	84.9
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	55.76	67.41
KRH39122	Soybean	cytosol	55.24	64.92
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	49.48	62.38
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	61.52	62.17
PGSC0003DMT400014727	Potato	peroxisome	52.62	59.47
EER98699	Sorghum	cytosol, peroxisome, plastid	55.5	58.89
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	55.24	58.61
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	54.97	58.33
TraesCS5D01G185900.1	Wheat	nucleus	54.97	58.33
HORVU5Hr1G055300.9	Barley	nucleus	54.97	58.33
TraesCS5A01G181600.1	Wheat	nucleus	53.93	57.22
Os09t0314400-01	Rice	mitochondrion	54.45	49.76
Bra036796.1-P	Field mustard	nucleus	24.87	30.16
Bra038901.1-P	Field mustard	nucleus	25.13	26.89
Bra005481.1-P	Field mustard	cytosol	25.39	25.8
Bra021870.1-P	Field mustard	endoplasmic reticulum	26.18	24.94
Bra018701.1-P	Field mustard	cytosol	24.08	24.53
Bra032043.1-P	Field mustard	nucleus	23.04	24.18
Bra007669.1-P	Field mustard	cytosol	23.04	23.53
Bra007820.1-P	Field mustard	nucleus	22.77	23.39
Bra007784.1-P	Field mustard	nucleus	23.04	22.45
Bra023979.1-P	Field mustard	cytosol	21.99	22.4
Bra014405.1-P	Field mustard	cytosol	21.47	17.56
Bra022205.1-P	Field mustard	mitochondrion	11.78	17.05
Bra000209.1-P	Field mustard	cytosol	21.99	12.82

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra025933	EnsemblPlants:Bra025933.1
EnsemblPlants:Bra025933.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4EAX4	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000253F3D2

Description

AT1G18030 (E=3e-105) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA06:+:6912135..6914278

Molecular Weight (calculated)

41799.0 Da

IEP (calculated)

7.475

GRAVY (calculated)

-0.284

Length

382 amino acids

Sequence
(BLAST)

001: MEKQPNQKHT ADSFSSEDLI SPPVKKAKKS EETGCDNTKD PKIPSGGEEV IPAVDNRAAE EGSSSCISEE KKGFVFEADV AEDKGARQAM EDVSLVLPDA
101: SLDFPGKLRC GHFAIYDGHG GRLAAEFAKK HLHLNVLSSG LPRELVSLQL LSRSFLDPNV RLLLQMDVKV AKKAILDGFR KTDELLLQES VSVLTFVYGS
201: GGWQDGATAV CVWIVDQKVF IANIGDAKAV LARSSPTDES GSHTEACNPL KAIVLTREHK AIYPQERSRI QKSGGVVSSN GRLQGRLEVS RAFGDRQFKK
301: YGVIATPDIH AFELTERENF MILGCDGLWE VFGPSDAVGF VQKLLKEGLP VSTISRRLVK EAVKERRCKD NCTAIVIVFK RG

Best Arabidopsis Sequence Match ( AT1G18030.1 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.