Factsheet for Zm00001d020053_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98699	Sorghum	cytosol, peroxisome, plastid	91.94	91.94
TraesCS5D01G185900.1	Wheat	nucleus	77.5	77.5
HORVU5Hr1G055300.9	Barley	nucleus	77.22	77.22
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	77.22	77.22
TraesCS5A01G181600.1	Wheat	nucleus	76.11	76.11
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	64.17	73.1
Os09t0314400-01	Rice	mitochondrion	77.78	66.99
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	52.78	62.71
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	58.61	60.11
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	62.5	59.52
PGSC0003DMT400014727	Potato	peroxisome	53.06	56.51
Bra025933.1-P	Field mustard	cytosol	58.33	54.97
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.33	54.3
KRH48594	Soybean	cytosol, peroxisome, plastid	35.0	51.85
Zm00001d052018_P001	Maize	cytosol	20.83	27.57
Zm00001d029772_P001	Maize	plastid	26.39	25.33
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	23.89	25.29
Zm00001d046450_P001	Maize	cytosol, plastid	25.28	25.28
Zm00001d000391_P002	Maize	plastid	25.83	25.0
Zm00001d036710_P001	Maize	extracellular	25.0	24.66
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	7.5	24.55
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	10.83	24.53
Zm00001d045128_P001	Maize	cytosol	23.61	24.01
Zm00001d021390_P001	Maize	cytosol	23.89	23.69
Zm00001d025780_P001	Maize	cytosol	23.06	22.74
Zm00001d008171_P001	Maize	cytosol	24.17	21.97
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	7.22	21.67
Zm00001d046828_P003	Maize	cytosol	24.17	21.64
Zm00001d024732_P001	Maize	cytosol	23.89	21.23
Zm00001d015504_P004	Maize	extracellular	23.61	21.2
Zm00001d046831_P002	Maize	cytosol	23.61	20.88
Zm00001d009364_P001	Maize	cytosol	22.78	17.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100191383	Gene3D:3.60.40.10	MapMan:35.1	UniProt:B4F8M0
EMBL:BT033458	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	EMBL:KJ728221	ProteinID:ONM54179.1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00017B6379	EnsemblPlantsGene:Zm00001d020053	EnsemblPlants:Zm00001d020053_P002	EnsemblPlants:Zm00001d020053_T002	:	:

Description

Probable protein phosphatase 2C 8

Coordinates

chr7:-:88878840..88893492

Molecular Weight (calculated)

39026.1 Da

IEP (calculated)

7.030

GRAVY (calculated)

-0.389

Length

360 amino acids

Sequence
(BLAST)

001: MAHQKREGSY ADDDSTSKRI KGTDTASETG DSVESSVSQQ MDAEARRTCQ KESEAPSDKC VSDGECAANS KVLGEQKMVL TVVEADAADD KGCRHTMEDA
101: WVVLPNAGAE SPGSLRCVHF AIYDGHGGRL AADYAQKHLH QNVIAAGLPR ELMDIKAAKK AVIEGFRRTD ESLLQESTKG NWQDGATAVC VWILGQTVVV
201: ANVGDAKAVL ARSISTEGEG VVDETKSQLK AIVLTREHKA IFSQERSRIQ KAGGSVGSNG RLQGRIEVSR AFGDRQFKKV GLIATPDVHS FELTKKDHFI
301: ILGCDGLWGV FGPGDAVEFV QNQLKETSSA TLAVRRLVKE AVRERRCKDN CTAVLIVFRH

Best Arabidopsis Sequence Match ( AT1G18030.1 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.