Factsheet for Zm00001d025780_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26265	Sorghum	cytosol	64.66	68.6
OQU81890	Sorghum	plastid	80.82	66.74
Os04t0500900-00	Rice	plasma membrane	41.64	52.6
TraesCS2B01G374900.1	Wheat	cytosol	47.95	45.81
TraesCS2D01G354600.1	Wheat	cytosol	47.95	45.45
HORVU2Hr1G086370.2	Barley	cytosol	47.95	45.34
TraesCS2A01G354400.1	Wheat	cytosol	47.4	45.29
Zm00001d021390_P001	Maize	cytosol	39.73	39.94
Zm00001d036710_P001	Maize	extracellular	38.9	38.9
Zm00001d015504_P004	Maize	extracellular	38.9	35.41
Zm00001d046828_P003	Maize	cytosol	38.08	34.58
Zm00001d046831_P002	Maize	cytosol	37.53	33.66
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	14.25	32.7
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	9.59	31.82
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	9.59	29.17
Zm00001d052018_P001	Maize	cytosol	20.27	27.21
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	23.29	25.0
Zm00001d046450_P001	Maize	cytosol, plastid	24.38	24.72
Zm00001d000391_P002	Maize	plastid	23.56	23.12
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	22.74	23.06
Zm00001d029772_P001	Maize	plastid	23.56	22.93
Zm00001d045128_P001	Maize	cytosol	21.64	22.32
Zm00001d008171_P001	Maize	cytosol	23.84	21.97
Zm00001d024732_P001	Maize	cytosol	24.11	21.73
Zm00001d009364_P001	Maize	cytosol	23.01	17.54

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100272833	Gene3D:3.60.40.10	MapMan:35.1	ProteinID:AQK44567.1
UniProt:B4FR17	EMBL:BT039555	EMBL:BT085959	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	EMBL:KJ727926	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF285	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI00017B7A9E	EnsemblPlantsGene:Zm00001d025780	EnsemblPlants:Zm00001d025780_P001	EnsemblPlants:Zm00001d025780_T001	SEG:seg

Description

Probable protein phosphatase 2C 21

Coordinates

chr10:+:129424865..129428134

Molecular Weight (calculated)

39852.2 Da

IEP (calculated)

6.416

GRAVY (calculated)

-0.250

Length

365 amino acids

Sequence
(BLAST)

001: MSLAVPVTLK TTQSGENERL EYAVSAMQGY RLNMEDAHAI VLNLDAATGT SFFGVYDGHG GPAVSKYCAR HLHAELRRHE SFRDNLQTAI ERTFLRMDEM
101: MRDRRAGREL SGYGGNDNWK AYRKAINMSL FLPFCQKPAY QGPVMDGCTA CVVLIRDNRI IVGNAGDSRC VLSRNNQAID LSTDFKPNLP DERQRIEAAG
201: HVVTFSERGN VHRIDDGIAV SRSLGDLMYK DNNDLGPVQQ AITAFPEVRT EEITQDDQFL IIACDGIWDC LTSQQAVDFI RIYSFADVGL ASICEALLAH
301: CVAQPRGRDN MTVILVRFKT PGACQVRASN VPPPPIRQDA AASQAAGSQA AAASQAAGSQ AAAGH

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.