CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025780_P001	Maize	cytosol	68.6	64.66
OQU81890	Sorghum	plastid	74.13	57.69
Os04t0500900-00	Rice	plasma membrane	40.99	48.79
TraesCS2A01G354400.1	Wheat	cytosol	40.7	36.65
TraesCS2D01G354600.1	Wheat	cytosol	40.99	36.62
HORVU2Hr1G086370.2	Barley	cytosol	40.99	36.53
TraesCS2B01G374900.1	Wheat	cytosol	40.41	36.39
KXG36172	Sorghum	cytosol	35.47	33.61
EES04637	Sorghum	cytosol	34.88	33.43
EER90135	Sorghum	cytosol	34.3	32.24
KXG30563	Sorghum	mitochondrion	27.91	23.41
KXG39006	Sorghum	plastid	21.8	20.16
EES05962	Sorghum	cytosol	20.64	20.0
EER88596	Sorghum	cytosol, plastid	20.64	19.72
EER98699	Sorghum	cytosol, peroxisome, plastid	20.06	19.17
EES17660	Sorghum	cytosol, peroxisome, plastid	22.09	18.95
EER89322	Sorghum	cytosol	19.19	18.64
EES02832	Sorghum	cytosol	20.93	17.96
KXG32675	Sorghum	cytosol	3.2	17.46
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	5.52	8.8

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:35.1	UniProt:A0A1B6PKT3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG26265	ProteinID:KXG26265
ProteinID:KXG26265.1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF285	SMART:SM00332	EnsemblPlantsGene:SORBI_3006G073100	SUPFAM:SSF81606	UniParc:UPI00081ACF62

Description

hypothetical protein

Coordinates

chr6:-:43547533..43554736

Molecular Weight (calculated)

38644.8 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.317

Length

344 amino acids

Sequence
(BLAST)

001: MALAVPVTLK TTEEGGNERF DYAVSAMQGY RPNMEDAHAI VLNLDAATGT SFFGVYDGQG GPAVSKYCAR HLHTELLRHE SFRDNLQTAI ERTFLRMDEM
101: MKDRSAGWEL SGYGGNDNWK AYRKALRWSL LLPFFCQKPA YPGPENDGCT VCVVLIRGNQ IIVGNAGDSR CVLSRNNVAV NLSTDFKPSL PATGHAVTFS
201: ERKCHRVDDG IAIAISLGDL LYKDNKDLCP QQQAITAFPE ELTQDDQFLI IACNGIWDCQ TRHQAVDFIR TQSNTVAYGM LKHGAQIAKF ADKIRNTVTF
301: VLDGSNYDVW EQYMMVMAHL RFWYICAHST IQRNNTDRSQ TGWD

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.