CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0606900-01	Rice	cytosol	32.93	39.71
TraesCS4A01G120800.1	Wheat	cytosol	36.1	39.05
TraesCS7A01G532000.1	Wheat	mitochondrion	24.15	38.52
TraesCS6A01G037000.1	Wheat	cytosol	30.0	38.44
TraesCS4D01G185200.1	Wheat	mitochondrion	37.32	38.06
TraesCS4B01G184100.1	Wheat	mitochondrion	36.83	37.38
TraesCS6B01G051200.1	Wheat	cytosol	29.51	37.23
HORVU4Hr1G053970.1	Barley	mitochondrion, nucleus, plastid	38.54	36.92
EER90135	Sorghum	cytosol	30.73	34.43
EES04637	Sorghum	cytosol	30.0	34.26
KXG36172	Sorghum	cytosol	30.0	33.88
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	16.83	31.08
TraesCS7D01G513700.1	Wheat	mitochondrion	30.49	30.12
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	33.17	29.06
KXG26265	Sorghum	cytosol	23.41	27.91
OQU81890	Sorghum	plastid	29.02	26.92
Os02t0598500-00	Rice	cytosol	34.15	26.87
Os02t0599150-01	Rice	cytosol	34.15	26.87
HORVU5Hr1G104910.2	Barley	cytosol	26.83	24.61
Os02t0607500-00	Rice	vacuole	33.17	23.41
EES05962	Sorghum	cytosol	18.54	21.41
EER89322	Sorghum	cytosol	18.29	21.19
KXG39006	Sorghum	plastid	17.8	19.62
EER88596	Sorghum	cytosol, plastid	16.59	18.89
Os02t0599151-00	Rice	vacuole	33.66	18.78
EES02832	Sorghum	cytosol	18.05	18.45
EES17660	Sorghum	cytosol, peroxisome, plastid	17.8	18.2
EER98699	Sorghum	cytosol, peroxisome, plastid	15.85	18.06
KXG32675	Sorghum	cytosol	2.68	17.46
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	4.88	9.26
Os02t0599200-01	Rice	cytosol, peroxisome	9.51	8.46

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A194YQQ5	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG30563	ProteinID:KXG30563	ProteinID:KXG30563.1
ProteinID:OQU85256.1	ProteinID:OQU85257.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF323	SMART:SM00332
EnsemblPlantsGene:SORBI_3004G204600	SUPFAM:SSF81606	UniParc:UPI0007F2BB8D	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:55604255..55617470

Molecular Weight (calculated)

45854.7 Da

IEP (calculated)

6.285

GRAVY (calculated)

-0.260

Length

410 amino acids

Sequence
(BLAST)

001: MGVLFNKRIS FLSVPNYGLG LPTARICTSG ALHTLESAYD SKARAPFKGD KIIIPFGNMV MNCMGKQNPA MGAASSYPAE SDFNFEGETS RFKYGVHCMR
101: GRRQKMEDTF SAIADLDGTS STSFFGVYDG HGGSDISSYC AKQFHVEVLK HPEYLDSPVN SLQSVFFRMD ELIEQSDEWR EKVNPGGCTS CLKNGVWPFN
201: QWPFNTEYGS EGSTACVVLI RDNEIIVGNV GDSQCLLFVN GQTMVLTQCH VPCDVDESER IRYSGGYLIS DCWKIRNPEH RAGGLVALNN PPFVTLPISR
301: SIGDSVFKQN KSLLPKDQIV TCEPRMKTVE ITEDTEFLVI ASNGIWKWLT HERIVQTIRP YLLEGETDLR FICKQVCIAA ANSCVMRDDM SIILVQFKKH
401: AKSTEDKDHH

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.