CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

nucleus 2
plastid 1
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009364_P001	Maize	cytosol	87.04	39.25
Os01t0541900-01	Rice	cytosol	74.54	24.51
HORVU3Hr1G047160.19	Barley	cytosol	72.22	23.74
TraesCS3B01G378000.1	Wheat	cytosol	71.3	23.55
TraesCS3D01G203100.1	Wheat	cytosol	70.83	23.29
TraesCS3A01G200800.1	Wheat	cytosol	70.83	23.29
GSMUA_Achr4P13340_001	Banana	cytosol, peroxisome, plastid	56.94	18.55
VIT_08s0040g00760.t01	Wine grape	cytosol	56.02	18.36
Solyc01g056690.2.1	Tomato	cytosol	54.63	18.07
KRH71677	Soybean	cytosol	52.31	17.15
CDY22485	Canola	cytosol	51.39	16.89
Bra000209.1-P	Field mustard	cytosol	50.0	16.49
CDY35434	Canola	cytosol, plastid	50.0	16.44
AT2G40860.1	Thale cress	plastid	49.54	16.26
EER88596	Sorghum	cytosol, plastid	15.28	9.17
EES17660	Sorghum	cytosol, peroxisome, plastid	15.28	8.23
KXG39006	Sorghum	plastid	13.89	8.06
EES02832	Sorghum	cytosol	14.81	7.98
EER89322	Sorghum	cytosol	12.96	7.91
EES04637	Sorghum	cytosol	12.5	7.52
EER98699	Sorghum	cytosol, peroxisome, plastid	12.5	7.5
EER90135	Sorghum	cytosol	11.57	6.83
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	6.48	6.8
EES05962	Sorghum	cytosol	11.11	6.76
KXG36172	Sorghum	cytosol	10.65	6.34
KXG26265	Sorghum	cytosol	8.8	5.52
KXG30563	Sorghum	mitochondrion	9.26	4.88
OQU81890	Sorghum	plastid	9.26	4.52
KXG32675	Sorghum	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.510.10	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1B6Q434
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KXG32674	ProteinID:KXG32674	ProteinID:KXG32674.1	InterPro:Kinase-like_dom_sf	PFAM:PF00481
PFAM:PF07714	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR45507	EnsemblPlantsGene:SORBI_3003G182600
SUPFAM:SSF56112	SUPFAM:SSF81606	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI00081AE040	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:48306889..48307692

Molecular Weight (calculated)

23948.0 Da

IEP (calculated)

4.798

GRAVY (calculated)

-0.302

Length

216 amino acids

Sequence
(BLAST)

001: MTYTEQQLTA AIVSQGLRPA LALPESGAPP TLLSLIQRCW DPDPEKRPSF EDIIDELNIV QTHLVSNASV PSSAVSKSQN GTIEVHQYQE ALNWLNQGEL
101: FVKRSSRSDL KSLWSGCFDQ SSEYHPTLSW GSFATCGRRE TMEDTHFLLP HMSEEKDVFA FGIFDGHRGS AAAEFSVRAV PGFLKQFGQG ASPTDALSEA
201: FVSTDLAFRE ELILHR

Best Arabidopsis Sequence Match ( AT2G40860.4 )
(BLAST)

001: MFFFDFYESG TLAEKLHVEE WSPSIDQVLL ITLHLAKALQ YLHNNGIVHR DVKPANVLLD EKFFPYLADF GLAEYKKNLR EVNLQNWRSS GKPTGGFHKK
101: NMVGTLIYMA PEILRKDMYT EKADIYSFGI LINELLTGVV PYTDRRAEAQ AHTVLEMNYT EQQLTVAIVS SGLRPALAEI GLHLPKSLLS LIQNCWESDP
201: SKRPSSDNVV LELESIWEQV RGKQQGHLLE KTSNSQSDTD GADIIKNSGD YRDTVNWFSQ GECLSKKSSV STVFDVKLWS SSTDEPSRYV PVISCGSFAT
301: CGRRESMEDT HFIIPHMCNE ESIHLFAIFD GHRGAAAAEF SAQVLPGLVQ SLCSTSAGEA LSQAFVRTDL AFRQELDSHR QSKRVSQKDW HPGCTAIASL
401: LVENKLFVAN VGDSRAILCR AGHPFALSKA HLATCIDERN RVIGEGGRIE WLVDTWRVAP AGLQVTRSIG DDDLKPAVTA EPEISETILS ADDEFLVMAS
501: DGLWDVMNDE EVIGIIRDTV KEPSMCSKRL ATEAAARGSG DNITVIVVFL RPVSTAERIY

Arabidopsis Description

Protein kinase and PP2C-like domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q940A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.