CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	91.94	91.94
TraesCS5D01G185900.1	Wheat	nucleus	77.5	77.5
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	77.22	77.22
HORVU5Hr1G055300.9	Barley	nucleus	76.67	76.67
TraesCS5A01G181600.1	Wheat	nucleus	75.83	75.83
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	64.72	73.73
Os09t0314400-01	Rice	mitochondrion	78.61	67.7
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	53.33	63.37
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	60.0	61.54
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	63.61	60.58
PGSC0003DMT400014727	Potato	peroxisome	54.44	57.99
Bra025933.1-P	Field mustard	cytosol	58.89	55.5
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.89	55.2
KRH48594	Soybean	cytosol, peroxisome, plastid	35.83	53.09
KXG32675	Sorghum	cytosol	4.72	26.98
EER88596	Sorghum	cytosol, plastid	26.11	26.11
KXG39006	Sorghum	plastid	26.67	25.81
EES05962	Sorghum	cytosol	25.28	25.63
EER90135	Sorghum	cytosol	25.28	24.86
EER89322	Sorghum	cytosol	24.17	24.58
EES04637	Sorghum	cytosol	24.44	24.51
KXG36172	Sorghum	cytosol	24.44	24.24
EES02832	Sorghum	cytosol	25.56	22.94
EES17660	Sorghum	cytosol, peroxisome, plastid	24.44	21.95
KXG26265	Sorghum	cytosol	19.17	20.06
OQU81890	Sorghum	plastid	23.06	18.78
KXG30563	Sorghum	mitochondrion	18.06	15.85
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	7.5	12.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EntrezGene:8071899	UniProt:C5X947
EnsemblPlants:EER98699	ProteinID:EER98699	ProteinID:EER98699.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	ProteinID:KXG35376.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SMART:SM00332
EnsemblPlantsGene:SORBI_3002G166500	SUPFAM:SSF81606	unigene:Sbi.10521	UniParc:UPI0001A83CD9	RefSeq:XP_002462178.1	:

Description

hypothetical protein

Coordinates

chr2:-:52009662..52015758

Molecular Weight (calculated)

38785.9 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.427

Length

360 amino acids

Sequence
(BLAST)

001: MAHQKREGSS TDDDGTSKRL KGTDTASETG GSVKASVSQQ MDAEARRNCQ KDSQAPSAKC VSDGEAAANS QVSGERKMVL TAVEADAAED KGCRHTMEDA
101: WVVLPNADAE TPGSLRCAHF AIYDGHGGRL AADYAQKHLH QNVIAAGLPR ELMDVKAAKK AVIEGFRRTD ESLLQESTKG NWQDGATAVC VWILGQTVVV
201: ANAGDAKAVL ARSVSTEGEG MVNETKSQLK AIVLTREHKA IFPQERSRIQ KAGGSVGSNG RLQGRIEVSR AFGDRQFKKV GLIATPDVHS FELTKKDHFI
301: ILGCDGLWGV FGPGDAVEFV QNQLKETSSA TLAVRRLVKE AIRERRCKDN CTAVLVVFKH

Best Arabidopsis Sequence Match ( AT1G18030.1 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.