Factsheet for TraesCS5B01G179300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G185900.1	Wheat	nucleus	97.78	97.78
TraesCS5A01G181600.1	Wheat	nucleus	95.0	95.0
HORVU5Hr1G055300.9	Barley	nucleus	94.44	94.44
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	77.22	77.22
EER98699	Sorghum	cytosol, peroxisome, plastid	77.22	77.22
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	64.72	73.73
Os09t0314400-01	Rice	mitochondrion	80.83	69.62
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	51.67	61.39
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	59.44	60.97
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	61.94	58.99
PGSC0003DMT400014727	Potato	peroxisome	52.5	55.92
Bra025933.1-P	Field mustard	cytosol	58.61	55.24
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.33	54.3
KRH48594	Soybean	cytosol, peroxisome, plastid	36.11	53.5
TraesCS1B01G216500.1	Wheat	plastid	26.67	25.95
TraesCS7B01G045100.1	Wheat	cytosol	25.28	25.78
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	25.28	25.14
TraesCS6B01G398500.1	Wheat	cytosol	24.44	25.0
TraesCS5B01G082500.1	Wheat	cytosol	25.83	24.28
TraesCS1B01G095600.1	Wheat	cytosol	25.28	23.7
TraesCS5B01G362300.1	Wheat	cytosol	24.17	22.77
TraesCS6B01G051200.1	Wheat	cytosol	20.56	22.77
TraesCS7B01G411900.1	Wheat	cytosol	24.72	21.65
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	23.33	21.21
TraesCS2B01G374900.1	Wheat	cytosol	22.5	21.2
TraesCS4B01G184100.1	Wheat	mitochondrion	21.94	19.55
TraesCS3B01G378000.1	Wheat	cytosol	22.22	12.23

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5B01G179300	EnsemblPlants:TraesCS5B01G179300.1	TIGR:cd00143	:	:

Description

No Description!

Coordinates

chr5B:-:327080214..327088293

Molecular Weight (calculated)

39005.3 Da

IEP (calculated)

7.600

GRAVY (calculated)

-0.394

Length

360 amino acids

Sequence
(BLAST)

001: MTHQKREASS SNEDWVSKRP KGAATSTEKD CQVETAGSQE MNGEKRDTPQ NGSNLPLDPC ISDEKSTTIL EVPSQQEMIL TSVEADAAED KGCRHTMEDA
101: WVVLPDASMG SPGNLRSAHF AIYDGHGGRL AAEYAQKHLH PHVIAAGLPR ELMNVKVAKK AIIEGFRKAD ESLLQESAKG NWQDGATAVC VWVLGQTVLV
201: ANAGDAKAVL ARSTSTDGEG AVADTKSPLK AIVLTREHKA IFPQERSRIQ KAGGSVGPNG RLQGRIEVSR ALGDRHFKKV GLIATPDVHS FELTVKDHFI
301: ILGCDGLWGV FGPSDAVEFV QKQLKETSSA TLAVRRLVKE AVRERRCKDN CTAVLIVFKH

Best Arabidopsis Sequence Match ( AT1G18030.1 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.