Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G371100.1 | Wheat | plastid | 96.41 | 96.94 |
| TraesCS7D01G351600.1 | Wheat | cytosol, plastid | 97.51 | 96.45 |
| HORVU7Hr1G085010.2 | Barley | plastid | 96.41 | 95.62 |
| Os06t0597200-01 | Rice | cytosol | 85.64 | 84.47 |
| EER88596 | Sorghum | cytosol, plastid | 82.32 | 82.78 |
| Zm00001d046450_P001 | Maize | cytosol, plastid | 79.83 | 80.28 |
| GSMUA_Achr7P08470_001 | Banana | cytosol | 70.72 | 66.84 |
| KRH61828 | Soybean | cytosol | 67.96 | 66.49 |
| KRH52505 | Soybean | cytosol | 67.4 | 65.95 |
| Solyc06g065610.2.1 | Tomato | plastid | 67.96 | 65.6 |
| VIT_04s0008g04780.t01 | Wine grape | cytosol | 68.78 | 65.53 |
| GSMUA_Achr10P... | Banana | cytosol | 68.78 | 64.84 |
| PGSC0003DMT400067098 | Potato | cytosol, plastid | 67.13 | 64.8 |
| AT2G25620.2 | Thale cress | nucleus | 64.92 | 59.95 |
| Bra007784.1-P | Field mustard | nucleus | 62.98 | 58.16 |
| CDY11515 | Canola | mitochondrion | 61.05 | 58.16 |
| CDX76745 | Canola | nucleus | 62.71 | 57.91 |
| TraesCS7B01G045100.1 | Wheat | cytosol | 51.93 | 53.26 |
| TraesCS6B01G398500.1 | Wheat | cytosol | 50.28 | 51.7 |
| TraesCS1B01G216500.1 | Wheat | plastid | 50.28 | 49.19 |
| TraesCS1B01G095600.1 | Wheat | cytosol | 43.37 | 40.89 |
| TraesCS5B01G082500.1 | Wheat | cytosol | 41.99 | 39.69 |
| TraesCS5B01G362300.1 | Wheat | cytosol | 27.62 | 26.18 |
| TraesCS5B01G179300.1 | Wheat | cytosol, nucleus, peroxisome | 25.14 | 25.28 |
| TraesCS6B01G176200.4 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.97 | 23.74 |
| TraesCS7B01G411900.1 | Wheat | cytosol | 26.8 | 23.6 |
| TraesCS6B01G051200.1 | Wheat | cytosol | 19.89 | 22.15 |
| TraesCS4B01G184100.1 | Wheat | mitochondrion | 24.59 | 22.03 |
| TraesCS2B01G374900.1 | Wheat | cytosol | 22.65 | 21.47 |
| TraesCS3B01G378000.1 | Wheat | cytosol | 27.35 | 15.14 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:15.5.38 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0050688 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF346 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS7B01G256300 | EnsemblPlants:TraesCS7B01G256300.1 | TIGR:cd00143 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:475304867..475309269
Molecular Weight (calculated)
38950.0 Da
IEP (calculated)
4.808
GRAVY (calculated)
-0.194
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELRLGGGG GRGKPPIPSS ASARKSVLSR HASFARGPLS STKSETERTF ESTDVEYIPV VRSGGWADIG SRSSMEDVYI CCDNFLQDFG PENCEEGPSS
101: FYGVFDGHGG KHAADFVCSN LPRFIVEGDG FPGEIEKAVS SAFLQTDAAF ADACSVNSSL ASGTTALAAL IIGRSLLVAN AGDCRAVVCC RGKAVEMSRD
201: HKPSCNREKM RIEASGGYVY DGYLNGLLNV ARAIGDWHME GMKACDGLGP LSAEPEVMMR NLTEEDEFLI IGCDGIWDVF RSQNAVDFAR RRLQEHNDPV
301: ACCKELVDEA IKRKSGDNLS VVVVCFNSIA PPVLTAPRPR VQRSISAEGL RELQGFLDSL AD
101: FYGVFDGHGG KHAADFVCSN LPRFIVEGDG FPGEIEKAVS SAFLQTDAAF ADACSVNSSL ASGTTALAAL IIGRSLLVAN AGDCRAVVCC RGKAVEMSRD
201: HKPSCNREKM RIEASGGYVY DGYLNGLLNV ARAIGDWHME GMKACDGLGP LSAEPEVMMR NLTEEDEFLI IGCDGIWDVF RSQNAVDFAR RRLQEHNDPV
301: ACCKELVDEA IKRKSGDNLS VVVVCFNSIA PPVLTAPRPR VQRSISAEGL RELQGFLDSL AD
001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
Arabidopsis Description
AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.