Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76745 | Canola | nucleus | 86.48 | 86.48 |
| Bra007784.1-P | Field mustard | nucleus | 85.71 | 85.71 |
| CDY11515 | Canola | mitochondrion | 77.81 | 80.26 |
| KRH52505 | Soybean | cytosol | 67.09 | 71.08 |
| KRH61828 | Soybean | cytosol | 66.84 | 70.81 |
| VIT_04s0008g04780.t01 | Wine grape | cytosol | 67.86 | 70.0 |
| PGSC0003DMT400067098 | Potato | cytosol, plastid | 63.27 | 66.13 |
| EER88596 | Sorghum | cytosol, plastid | 60.2 | 65.56 |
| Solyc06g065610.2.1 | Tomato | plastid | 62.24 | 65.07 |
| TraesCS7A01G371100.1 | Wheat | plastid | 59.69 | 65.0 |
| TraesCS7B01G256300.1 | Wheat | mitochondrion, plastid | 59.95 | 64.92 |
| TraesCS7D01G351600.1 | Wheat | cytosol, plastid | 59.95 | 64.21 |
| HORVU7Hr1G085010.2 | Barley | plastid | 59.69 | 64.11 |
| Zm00001d046450_P001 | Maize | cytosol, plastid | 58.42 | 63.61 |
| Os06t0597200-01 | Rice | cytosol | 59.18 | 63.22 |
| GSMUA_Achr7P08470_001 | Banana | cytosol | 60.97 | 62.4 |
| GSMUA_Achr10P... | Banana | cytosol | 60.2 | 61.46 |
| AT3G51470.1 | Thale cress | nucleus | 42.86 | 46.54 |
| AT2G33700.1 | Thale cress | cytosol | 44.13 | 45.53 |
| AT3G62260.2 | Thale cress | cytosol | 39.8 | 40.62 |
| AT1G48040.1 | Thale cress | cytosol | 36.99 | 37.86 |
| AT3G17250.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 36.48 | 33.89 |
| AT1G18030.1 | Thale cress | cytosol, nucleus, peroxisome | 24.74 | 27.64 |
| AT4G31860.1 | Thale cress | cytosol | 23.72 | 26.05 |
| AT2G25070.2 | Thale cress | nucleus | 23.47 | 25.92 |
| AT2G40860.1 | Thale cress | plastid | 26.02 | 15.5 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:15.5.38 | Gene3D:3.60.40.10 | EntrezGene:817102 | UniProt:A0A178VZ04 |
| ProteinID:AAD31375.1 | ProteinID:AEC07725.1 | EMBL:AF326901 | EMBL:AF339719 | EMBL:AF436827 | ProteinID:ANM61961.1 |
| ArrayExpress:AT2G25620 | EnsemblPlantsGene:AT2G25620 | RefSeq:AT2G25620 | TAIR:AT2G25620 | RefSeq:AT2G25620-TAIR-G | EnsemblPlants:AT2G25620.2 |
| EMBL:AY039595 | EMBL:AY057740 | Unigene:At.74045 | Symbol:AtDBP1 | EMBL:BT002487 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | GO:GO:0050688 |
| InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_001324148.1 | RefSeq:NP_180133.1 | ProteinID:OAP11529.1 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF346 | UniProt:Q9SLA1 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI00000AC480 |
| SEG:seg | : | : | : | : | : |
Description
AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
Coordinates
chr2:-:10902716..10905267
Molecular Weight (calculated)
42676.2 Da
IEP (calculated)
5.314
GRAVY (calculated)
-0.338
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.