Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY13457 | Canola | cytosol | 90.48 | 91.76 |
CDX72331 | Canola | cytosol | 90.2 | 91.48 |
Bra023979.1-P | Field mustard | cytosol | 89.92 | 85.6 |
AT2G25070.2 | Thale cress | nucleus | 80.39 | 80.85 |
GSMUA_Achr4P12780_001 | Banana | cytosol | 77.31 | 77.53 |
GSMUA_Achr10P... | Banana | cytosol | 71.71 | 76.42 |
Solyc08g006060.2.1 | Tomato | cytosol | 71.15 | 74.71 |
Os02t0180000-01 | Rice | cytosol, plasma membrane | 74.23 | 73.2 |
VIT_04s0008g06720.t01 | Wine grape | cytosol, extracellular, mitochondrion | 78.71 | 71.5 |
Os06t0651600-01 | Rice | cytosol | 73.39 | 71.2 |
EES04637 | Sorghum | cytosol | 71.43 | 71.03 |
Zm00001d036710_P001 | Maize | extracellular | 71.43 | 69.86 |
EER90135 | Sorghum | cytosol | 71.43 | 69.67 |
HORVU6Hr1G029160.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 73.95 | 69.47 |
HORVU7Hr1G113110.1 | Barley | cytosol | 75.35 | 67.59 |
TraesCS6D01G137200.1 | Wheat | golgi | 73.67 | 67.09 |
TraesCS7A01G504800.1 | Wheat | cytosol | 74.23 | 66.58 |
TraesCS6A01G147900.4 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 73.67 | 66.41 |
TraesCS6B01G176200.4 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 73.39 | 66.16 |
Solyc08g074230.1.1 | Tomato | cytosol, nucleus, peroxisome | 50.14 | 66.05 |
TraesCS7D01G492000.1 | Wheat | nucleus | 74.79 | 64.96 |
TraesCS7B01G411900.1 | Wheat | cytosol | 74.23 | 64.48 |
Zm00001d015504_P004 | Maize | extracellular | 72.27 | 64.34 |
Zm00001d046828_P003 | Maize | cytosol | 71.71 | 63.68 |
Zm00001d046831_P002 | Maize | cytosol | 70.59 | 61.92 |
Zm00001d018815_P001 | Maize | cytosol, mitochondrion, peroxisome | 17.93 | 58.18 |
Zm00001d047200_P003 | Maize | golgi, mitochondrion, peroxisome | 25.21 | 56.6 |
GSMUA_Achr6P03990_001 | Banana | plastid | 68.63 | 54.08 |
Zm00001d039151_P002 | Maize | cytosol, mitochondrion, peroxisome | 17.65 | 52.5 |
AT3G51470.1 | Thale cress | nucleus | 25.49 | 25.21 |
AT2G33700.1 | Thale cress | cytosol | 26.61 | 25.0 |
AT1G18030.1 | Thale cress | cytosol, nucleus, peroxisome | 24.37 | 24.79 |
AT2G25620.2 | Thale cress | nucleus | 26.05 | 23.72 |
AT3G62260.2 | Thale cress | cytosol | 25.49 | 23.7 |
AT1G48040.1 | Thale cress | cytosol | 25.21 | 23.5 |
AT3G17250.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 24.09 | 20.38 |
AT2G40860.1 | Thale cress | plastid | 23.53 | 12.77 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.9 | EntrezGene:829315 | UniProt:A0A178UZG7 | ProteinID:AEE85968.1 |
ProteinID:AEE85969.1 | ArrayExpress:AT4G31860 | EnsemblPlantsGene:AT4G31860 | RefSeq:AT4G31860 | TAIR:AT4G31860 | RefSeq:AT4G31860-TAIR-G |
EnsemblPlants:AT4G31860.1 | TAIR:AT4G31860.1 | EMBL:AY057611 | EMBL:AY113024 | Unigene:At.24222 | EMBL:BX827528 |
ProteinID:CAB40756.1 | ProteinID:CAB79904.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006470 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 |
GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_194914.1 | RefSeq:NP_974656.1 |
ProteinID:OAO99045.1 | PFAM:PF00481 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2C |
InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 |
PANTHER:PTHR13832:SF385 | UniProt:Q9SZ53 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI00000A7C78 | : |
Description
Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
Coordinates
chr4:-:15406439..15409056
Molecular Weight (calculated)
39204.9 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.477
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.