Factsheet for TraesCS6D01G137200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	95.66	98.68
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	96.43	95.45
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	96.43	95.45
Os02t0180000-01	Rice	cytosol, plasma membrane	79.59	86.19
EES04637	Sorghum	cytosol	77.55	84.68
GSMUA_Achr4P12780_001	Banana	cytosol	71.94	79.21
KRH61652	Soybean	cytosol	38.27	77.72
GSMUA_Achr10P...	Banana	cytosol	66.07	77.31
KRH52312	Soybean	cytosol	67.86	77.1
Zm00001d015504_P004	Maize	extracellular	78.06	76.31
CDX72331	Canola	cytosol	68.37	76.14
CDY13457	Canola	cytosol	68.11	75.85
AT4G31860.1	Thale cress	cytosol	67.09	73.67
KRH15637	Soybean	cytosol	63.01	72.86
Solyc08g006060.2.1	Tomato	cytosol	62.5	72.06
AT2G25070.2	Thale cress	nucleus	64.8	71.55
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	71.68	71.5
TraesCS7D01G492000.1	Wheat	nucleus	74.74	71.29
KRH44580	Soybean	endoplasmic reticulum	66.84	71.2
CDX76775	Canola	nucleus	64.8	71.15
Bra023979.1-P	Field mustard	cytosol	67.6	70.67
KRH47317	Soybean	cytosol	66.07	70.38
KRH05380	Soybean	golgi	63.27	69.66
CDY64720	Canola	nucleus	63.78	68.49
CDY64719	Canola	nucleus	63.78	68.49
Bra007820.1-P	Field mustard	nucleus	64.8	68.28
Bra032043.1-P	Field mustard	nucleus	63.27	68.13
CDY53471	Canola	nucleus	63.01	67.86
KRH61653	Soybean	cytosol	22.7	65.44
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	45.15	65.31
CDY34740	Canola	nucleus	64.29	63.64
VIT_09s0018g01140.t01	Wine grape	nucleus	57.14	62.57
TraesCS5D01G369200.1	Wheat	cytosol	59.18	60.89
Solyc12g042570.1.1	Tomato	nucleus	50.77	59.58
GSMUA_Achr6P03990_001	Banana	plastid	66.84	57.84
TraesCS2D01G354600.1	Wheat	cytosol	35.97	36.62
TraesCS4D01G185200.1	Wheat	mitochondrion	36.22	35.32
TraesCS7D01G513700.1	Wheat	mitochondrion	34.95	33.01
TraesCS1D01G205700.1	Wheat	plastid	24.23	25.68
TraesCS7D01G351600.1	Wheat	cytosol, plastid	23.21	24.86
TraesCS7D01G144400.3	Wheat	cytosol	21.68	24.08
TraesCS5D01G089900.1	Wheat	cytosol	23.21	23.82
TraesCS5D01G185900.1	Wheat	nucleus	21.68	23.61
TraesCS1D01G079600.1	Wheat	cytosol	22.7	23.3
TraesCS3D01G203100.1	Wheat	cytosol	23.21	13.85

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6D01G137200
EnsemblPlants:TraesCS6D01G137200.1	TIGR:cd00143	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:105820472..105824143

Molecular Weight (calculated)

43094.2 Da

IEP (calculated)

5.797

GRAVY (calculated)

-0.306

Length

392 amino acids

Sequence
(BLAST)

001: MHWNVVNKVQ SYLNCGIHST SQVYVSLLAN VSVGISFLAK MGVYLSTPKT DKLSEDGEND KLKFGLSSMQ GWRASMEDAH SALLDLDNET AFFGVFDGHG
101: GRVVAKFCAK YLHSQVLKSE AYSSGDLGTA VHKAFFRMDE MMRGQRGWRE LSALGDKMNK FSGMIEGLIW SPRGSDSKNA EDDWALEEGP HSDFDGPTCG
201: STACVALVRN NQLVVANAGD SRCVISRAGQ AYNLSRDHKP ELVAERERIL KAGGFIRMGR INGSLNLARA IGDMEFKQNK FLPPEKQIVT SNPDINVVEL
301: CNEDDFLVLA CDGIWDCMSS QQLVDFIHEH IHTESSLSAV CERVLDRCLA PSTMGGDGCD NMTMILVQFK KPVSDKKKAD VGEQSAKGKE ES

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.