CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52312	Soybean	cytosol	95.34	53.33
KRH15637	Soybean	cytosol	79.79	45.43
GSMUA_Achr10P...	Banana	cytosol	78.76	45.37
GSMUA_Achr4P12780_001	Banana	cytosol	82.9	44.94
KRH44580	Soybean	endoplasmic reticulum	81.35	42.66
CDX76775	Canola	nucleus	78.76	42.58
KRH47317	Soybean	cytosol	80.83	42.39
KRH05380	Soybean	golgi	77.72	42.13
AT2G25070.2	Thale cress	nucleus	77.2	41.97
EES04637	Sorghum	cytosol	77.72	41.78
Os02t0180000-01	Rice	cytosol, plasma membrane	78.24	41.71
Bra032043.1-P	Field mustard	nucleus	76.68	40.66
CDY53471	Canola	nucleus	76.68	40.66
Bra007820.1-P	Field mustard	nucleus	77.72	40.32
Os06t0651600-01	Rice	cytosol	76.68	40.22
CDY64719	Canola	nucleus	75.65	40.0
CDY64720	Canola	nucleus	75.65	40.0
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.72	39.47
EER90135	Sorghum	cytosol	74.09	39.07
Zm00001d036710_P001	Maize	extracellular	73.58	38.9
CDY34740	Canola	nucleus	78.76	38.38
TraesCS6D01G137200.1	Wheat	golgi	77.72	38.27
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	78.24	38.13
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	77.72	37.88
TraesCS7A01G504800.1	Wheat	cytosol	77.72	37.69
HORVU7Hr1G113110.1	Barley	cytosol	77.72	37.69
Zm00001d015504_P004	Maize	extracellular	78.24	37.66
TraesCS7D01G492000.1	Wheat	nucleus	78.24	36.74
TraesCS7B01G411900.1	Wheat	cytosol	78.24	36.74
Zm00001d046828_P003	Maize	cytosol	74.09	35.57
Zm00001d046831_P002	Maize	cytosol	72.54	34.4
GSMUA_Achr6P03990_001	Banana	plastid	77.72	33.11
KRH48594	Soybean	cytosol, peroxisome, plastid	19.69	15.64
KRH60899	Soybean	cytosol	23.32	13.64
KRH39122	Soybean	cytosol	22.8	13.54
KRH52505	Soybean	cytosol	24.87	12.97
KRH61828	Soybean	cytosol	24.87	12.97
KRH31749	Soybean	cytosol	26.42	12.88
KRH37886	Soybean	cytosol	25.39	12.86
KRH69165	Soybean	cytosol	25.91	12.63
KRH20243	Soybean	cytosol	24.87	12.53
KRH03568	Soybean	cytosol	24.87	12.53
KRH12874	Soybean	cytosol	24.35	12.4
KRH76528	Soybean	cytosol	22.8	11.76
KRH51582	Soybean	cytosol	23.32	11.69
KRH28935	Soybean	nucleus	22.28	11.5
KRH02420	Soybean	cytosol	22.28	11.32
KRH50630	Soybean	cytosol	21.76	10.88
KRH36917	Soybean	cytosol	22.8	10.86
KRH71677	Soybean	cytosol	23.32	6.83
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	3.63	4.4
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	1.04	1.82
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	1.04	1.67
KRH61653	Soybean	cytosol	1.04	1.47
KRH62979	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	EMBL:ACUP02002179	EnsemblPlantsGene:GLYMA_04G060300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K7KID3	ProteinID:KRH61647.1	ProteinID:KRH61648.1
ProteinID:KRH61649.1	ProteinID:KRH61650.1	ProteinID:KRH61651.1	EnsemblPlants:KRH61652	ProteinID:KRH61652	ProteinID:KRH61652.1
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002961C52

Description

hypothetical protein

Coordinates

chr4:+:4933768..4937846

Molecular Weight (calculated)

21179.0 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.383

Length

193 amino acids

Sequence
(BLAST)

001: MGIYLSSPKT EKFSEDGEND CLRYGLSSMQ GWRATMEDAH AAYTDLDEST SFFGVYDGHG GKVVAKFCAK FLHQQVLKSE TYLTGDIGTS LQKAFLRMDE
101: MMRGQKGWRE LSILGDKINK FTGMIEGLIW SPRSSDGNCQ VDDWGLEEGP HSDFAGPTSG STACVAVIRN NQLVVANAGD SRCVISRKGQ VNL

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.