Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018815_P001 | Maize | cytosol, mitochondrion, peroxisome | 70.83 | 77.27 |
| Zm00001d047200_P003 | Maize | golgi, mitochondrion, peroxisome | 97.5 | 73.58 |
| KRH61653 | Soybean | cytosol | 45.83 | 40.44 |
| Zm00001d036710_P001 | Maize | extracellular | 67.5 | 22.19 |
| Solyc08g074230.1.1 | Tomato | cytosol, nucleus, peroxisome | 46.67 | 20.66 |
| EER90135 | Sorghum | cytosol | 61.67 | 20.22 |
| Solyc08g006060.2.1 | Tomato | cytosol | 54.17 | 19.12 |
| GSMUA_Achr10P... | Banana | cytosol | 52.5 | 18.81 |
| Zm00001d046831_P002 | Maize | cytosol | 63.33 | 18.67 |
| Zm00001d046828_P003 | Maize | cytosol | 62.5 | 18.66 |
| GSMUA_Achr4P12780_001 | Banana | cytosol | 55.0 | 18.54 |
| Os06t0651600-01 | Rice | cytosol | 56.67 | 18.48 |
| CDX72331 | Canola | cytosol | 53.33 | 18.18 |
| KRH52312 | Soybean | cytosol | 51.67 | 17.97 |
| CDY13457 | Canola | cytosol | 52.5 | 17.9 |
| KRH15637 | Soybean | cytosol | 50.0 | 17.7 |
| AT4G31860.1 | Thale cress | cytosol | 52.5 | 17.65 |
| CDX76775 | Canola | nucleus | 50.83 | 17.09 |
| HORVU7Hr1G113110.1 | Barley | cytosol | 56.67 | 17.09 |
| TraesCS7A01G504800.1 | Wheat | cytosol | 56.67 | 17.09 |
| KRH05380 | Soybean | golgi | 50.0 | 16.85 |
| Bra023979.1-P | Field mustard | cytosol | 52.5 | 16.8 |
| VIT_04s0008g06720.t01 | Wine grape | cytosol, extracellular, mitochondrion | 55.0 | 16.79 |
| Solyc12g042570.1.1 | Tomato | nucleus | 46.67 | 16.77 |
| Bra032043.1-P | Field mustard | nucleus | 50.83 | 16.76 |
| Zm00001d015504_P004 | Maize | extracellular | 55.83 | 16.71 |
| KRH44580 | Soybean | endoplasmic reticulum | 50.83 | 16.58 |
| KRH47317 | Soybean | cytosol | 50.83 | 16.58 |
| TraesCS7B01G411900.1 | Wheat | cytosol | 56.67 | 16.55 |
| TraesCS7D01G492000.1 | Wheat | nucleus | 56.67 | 16.55 |
| CDY53471 | Canola | nucleus | 50.0 | 16.48 |
| CDY64719 | Canola | nucleus | 50.0 | 16.44 |
| CDY64720 | Canola | nucleus | 50.0 | 16.44 |
| Bra007820.1-P | Field mustard | nucleus | 50.83 | 16.4 |
| AT2G25070.2 | Thale cress | nucleus | 48.33 | 16.34 |
| CDY34740 | Canola | nucleus | 49.17 | 14.9 |
| VIT_09s0018g01140.t01 | Wine grape | nucleus | 44.17 | 14.8 |
| Zm00001d021390_P001 | Maize | cytosol | 42.5 | 14.05 |
| GSMUA_Achr6P03990_001 | Banana | plastid | 50.83 | 13.47 |
| Zm00001d025780_P001 | Maize | cytosol | 29.17 | 9.59 |
| Zm00001d046450_P001 | Maize | cytosol, plastid | 27.5 | 9.17 |
| Zm00001d052018_P001 | Maize | cytosol | 20.0 | 8.82 |
| Zm00001d018394_P003 | Maize | endoplasmic reticulum, vacuole | 25.0 | 8.82 |
| Zm00001d045128_P001 | Maize | cytosol | 25.0 | 8.47 |
| Zm00001d000391_P002 | Maize | plastid | 25.83 | 8.33 |
| Zm00001d029772_P001 | Maize | plastid | 25.83 | 8.27 |
| Zm00001d008171_P001 | Maize | cytosol | 25.0 | 7.58 |
| Zm00001d020053_P002 | Maize | cytosol, nucleus, peroxisome | 21.67 | 7.22 |
| Zm00001d024732_P001 | Maize | cytosol | 24.17 | 7.16 |
| Zm00001d009364_P001 | Maize | cytosol | 19.17 | 4.8 |
| KRH61652 | Soybean | cytosol | 1.67 | 1.04 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | UniProt:A0A1D6MDW4 | ProteinID:AQK88841.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF385 | SUPFAM:SSF81606 | UniParc:UPI0008434761 | EnsemblPlantsGene:Zm00001d039151 | EnsemblPlants:Zm00001d039151_P002 | EnsemblPlants:Zm00001d039151_T002 |
Description
Probable protein phosphatase 2C 21
Coordinates
chr6:-:171104761..171105771
Molecular Weight (calculated)
13519.4 Da
IEP (calculated)
4.817
GRAVY (calculated)
0.142
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHVNGNLNL SRAIGDMKFK QNKFLPPDKQ ILTANPDINI VELCDVDEFI VLACDGIWDC MSSQQLVDFI REHIDTVSTK QFNTICPFEN CKHHLRITFG
101: LSLAIAHADV VLAICFLETE
101: LSLAIAHADV VLAICFLETE
001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSVS
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSVS
Arabidopsis Description
Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.