Factsheet for Zm00001d052018_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05962	Sorghum	cytosol	90.07	69.01
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	77.21	61.76
Os02t0799000-01	Rice	cytosol, plastid	79.78	61.3
TraesCS6A01G363900.1	Wheat	cytosol	78.31	60.51
TraesCS6B01G398500.1	Wheat	cytosol	77.21	59.66
Zm00001d045128_P001	Maize	cytosol	72.06	55.37
HORVU6Hr1G086560.2	Barley	mitochondrion	78.31	54.76
GSMUA_Achr7P20900_001	Banana	nucleus	69.85	53.07
GSMUA_Achr3P13350_001	Banana	cytosol	55.15	51.02
VIT_11s0118g00700.t01	Wine grape	cytosol	65.44	50.0
KRH20243	Soybean	cytosol	66.54	47.26
KRH12874	Soybean	cytosol	65.81	47.23
KRH03568	Soybean	cytosol	65.81	46.74
KRH37886	Soybean	cytosol	65.44	46.72
PGSC0003DMT400020228	Potato	cytosol	65.44	46.48
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	52.94	45.57
Solyc07g007220.2.1	Tomato	nucleus	63.24	44.91
PGSC0003DMT400078867	Potato	nucleus	63.24	44.91
Zm00001d046450_P001	Maize	cytosol, plastid	50.74	38.33
Zm00001d000391_P002	Maize	plastid	47.79	34.95
Zm00001d029772_P001	Maize	plastid	46.69	33.87
Zm00001d008171_P001	Maize	cytosol	48.16	33.08
Zm00001d024732_P001	Maize	cytosol	45.59	30.62
Zm00001d021390_P001	Maize	cytosol	31.25	23.42
Zm00001d036710_P001	Maize	extracellular	31.25	23.29
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	13.6	23.27
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	9.19	22.73
Zm00001d046828_P003	Maize	cytosol	30.88	20.9
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	27.57	20.83
Zm00001d025780_P001	Maize	cytosol	27.21	20.27
Zm00001d046831_P002	Maize	cytosol	30.15	20.15
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	8.82	20.0
Zm00001d015504_P004	Maize	extracellular	29.04	19.7
Zm00001d009364_P001	Maize	cytosol	30.15	17.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100384116	MapMan:15.5.38	Gene3D:3.60.40.10	UniProt:A0A1D6QC07
ProteinID:AQK55771.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF299	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0007AA73A8	EnsemblPlantsGene:Zm00001d052018
EnsemblPlants:Zm00001d052018_P001	EnsemblPlants:Zm00001d052018_T001	SEG:seg	:	:	:

Description

DBP-transcription factor 1Probable protein phosphatase 2C 22

Coordinates

chr4:-:176597115..176600543

Molecular Weight (calculated)

29482.5 Da

IEP (calculated)

4.708

GRAVY (calculated)

-0.318

Length

272 amino acids

Sequence
(BLAST)

001: MCVEGLDDAA GTLAFGDHEN DRRDGAAMER VCENNFVPFI RSGEWSDIGG RDYMEDAHVC ISDLAKNFGS NSVDDEVISF YGVFDGHNGK DAAHYVRDNL
101: PRVIVEDADF PLELEKVVKR SFVQTDSKFA EKFSHHKGLC SGTTALTAMI FGRSLLVANA GDCRAVLSRR GTAIEMSKDH RPCCMNERKR VESLGGYVDD
201: GYLNGQLAVT RALGDWHLEV MKGTGRAGGG GAGGGPLSAE PELKMVTLSK DDEFLIIGSD GVWDSFSSQN AV

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.